RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TAP2Q03519 686 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 MGAT5Q09328 741 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 FASTKD3Q14CZ7 662 aaKnown RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 TEDDM1Q5T9Z0 273 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 HECTD2Q5U5R9 776 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 FRMPD2BQ6IN97 320 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 TCTN3Q6NUS6 607 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 PAQR3Q6TCH7 311 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 CSNK1A1LQ8N752 337 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 TMEM102Q8N9M5 508 aaPredicted RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 ALKBH8Q96BT7 664 aaKnown RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 HIST1H2AHQ96KK5 128 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 HIST1H2AJQ99878 128 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 PLCD4Q9BRC7 762 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 WDR83Q9BRX9 315 aaKnown RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 H2AFJQ9BTM1 129 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 RAB17Q9H0T7 212 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 NSMCE4AQ9NXX6 385 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 WHRNQ9P202 907 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 ANAPC2Q9UJX6 822 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 NXT1Q9UKK6 140 aaKnown RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 UTP11Q9Y3A2 253 aaKnown RBP12.33□□□□□ -0.44
CHMP3-208ENST00000486404 MED13Q9UHV7 2174 aa12.33□□□□□ -0.44
CHMP3-208ENST00000486404 FITM1A5D6W6 292 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 PYCARD-AS1I3L0S3 204 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 SLC16A5O15375 505 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 PRPF4O43172 522 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP3-208ENST00000486404 SUV39H1O43463 412 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 KLF7O75840 302 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-208ENST00000486404 IGHEP01854 428 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 FDXRP22570 491 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 CCND1P24385 295 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 GABRB3P28472 473 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 CCL11P51671 97 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 PRDX1Q06830 199 aaKnown RBP12.32□□□□□ -0.44
CHMP3-208ENST00000486404 KLRB1Q12918 225 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 FRG1Q14331 258 aaKnown RBP12.32□□□□□ -0.44
CHMP3-208ENST00000486404 MUM1Q2TAK8 710 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 MED25Q71SY5 747 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 STRA8Q7Z7C7 330 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 PAQR7Q86WK9 346 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 SPNS2Q8IVW8 549 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 TEX19Q8NA77 164 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 CLEC1AQ8NC01 280 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 PYROXD1Q8WU10 500 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 COL26A1Q96A83 441 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 CCDC138Q96M89 665 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 ZNF285Q96NJ3 590 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 ERP44Q9BS26 406 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 TRIM54Q9BYV2 358 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 PCBD2Q9H0N5 130 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 WDR54Q9H977 334 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 PARVBQ9HBI1 364 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 ARL15Q9NXU5 204 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 STOX2Q9P2F5 926 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-208ENST00000486404 TXNDC16Q9P2K2 825 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 CDC23Q9UJX2 597 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 ADAMTS6Q9UKP5 1117 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 MAU2Q9Y6X3 613 aa12.32□□□□□ -0.44
CHMP3-208ENST00000486404 LOC105369274A0A096LPK9 316 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 LOC102723532A0A0G2JNH3 316 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 E7ESA3 106 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 H0YGG7 62 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 TXNDC9O14530 226 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 HAT1O14929 419 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 FBLP22087 321 aaKnown RBP12.31□□□□□ -0.44
CHMP3-208ENST00000486404 CASRP41180 1078 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 GCGRP47871 477 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 OR1D4P47884 311 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 SLC12A2P55011 1212 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 ARF3P61204 181 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-208ENST00000486404 YBX1P67809 324 aaKnown RBP12.31□□□□□ -0.44
CHMP3-208ENST00000486404 TLE1Q04724 770 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 SSPNQ14714 243 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 MRPL14Q6P1L8 145 aaKnown RBP12.31□□□□□ -0.44
CHMP3-208ENST00000486404 PRMT9Q6P2P2 845 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 CYHR1Q6ZMK1 362 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 MBOAT1Q6ZNC8 495 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 OR4N4Q8N0Y3 316 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 CDKL2Q92772 493 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 PTERQ96BW5 349 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 VPS50Q96JG6 964 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 FER1L6-AS2Q96M78 137 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-208ENST00000486404 EPN3Q9H201 632 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 PLAC1Q9HBJ0 212 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 CUEDC1Q9NWM3 386 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-208ENST00000486404 GPR83Q9NYM4 423 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 CTSFQ9UBX1 484 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 PDE10AQ9Y233 779 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 VWA7Q9Y334 891 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 PCDHGA9Q9Y5G4 932 aaKnown RBP12.31□□□□□ -0.44
CHMP3-208ENST00000486404 PCSK5Q92824 1860 aa12.31□□□□□ -0.44
CHMP3-208ENST00000486404 IGKV1-8A0A0C4DH67 115 aa12.3□□□□□ -0.44
CHMP3-208ENST00000486404 A6NL46 340 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms