RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 BAZ1BQ9UIG0 1483 aaKnown RBP3.21□□□□□ -1.9
VPS41-213ENST00000485955 SHROOM2Q13796 1616 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 ADCY10Q96PN6 1610 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 GLOD5A6NK44 160 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 ARPC2O15144 300 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 GFPT2O94808 682 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 CD27P26842 260 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 PTGER4P35408 488 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 CLNS1AP54105 237 aaKnown RBP3.2□□□□□ -1.9
VPS41-213ENST00000485955 GUCY2DQ02846 1103 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 PAX8Q06710 450 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 HSPB3Q12988 150 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 EFTUD2Q15029 972 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS41-213ENST00000485955 C6orf163Q5TEZ5 329 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 CLEC4GQ6UXB4 293 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 KIF6Q6ZMV9 814 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 SH2D6Q7Z4S9 175 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 FAM9BQ8IZU0 186 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 AQP11Q8NBQ7 271 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 NKX3-1Q99801 234 aaPredicted RBP3.2□□□□□ -1.9
VPS41-213ENST00000485955 GPR88Q9GZN0 384 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 FAM49AQ9H0Q0 323 aaPredicted RBP3.2□□□□□ -1.9
VPS41-213ENST00000485955 WDR83OSQ9Y284 106 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 TMEM5Q9Y2B1 443 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 R4GN57 208 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 IFT140Q96RY7 1462 aa3.2□□□□□ -1.9
VPS41-213ENST00000485955 ALKQ9UM73 1620 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 SIGLEC1Q9BZZ2 1709 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 ZNF646O15015 1829 aaPredicted RBP3.19□□□□□ -1.9
VPS41-213ENST00000485955 TRIM77I1YAP6 450 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 IPO8O15397 1037 aaKnown RBP3.19□□□□□ -1.9
VPS41-213ENST00000485955 RAB40ALP0C0E4 278 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 LINGO3P0C6S8 592 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 GP1BBP13224 206 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 SOX3P41225 446 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 MTHFRP42898 656 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 ZNF75DP51815 510 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 TMEM50BP56557 158 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 HYIQ5T013 277 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 CES4AQ5XG92 561 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 PRR27Q6MZM9 219 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 LEKR1Q6ZMV7 388 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 DNAAF5Q86Y56 855 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 SYT2Q8N9I0 419 aaPredicted RBP3.19□□□□□ -1.9
VPS41-213ENST00000485955 SLC37A3Q8NCC5 494 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 OR4K1Q8NGD4 311 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 ATP8B4Q8TF62 1192 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 RASL10AQ92737 203 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 FAM71F1Q96KD3 344 aaPredicted RBP3.19□□□□□ -1.9
VPS41-213ENST00000485955 C4orf45Q96LM5 186 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 AGAP4Q96P64 663 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 SEPHS2Q99611 448 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 LPAR4Q99677 370 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 MRPL1Q9BYD6 325 aaKnown RBP3.19□□□□□ -1.9
VPS41-213ENST00000485955 TRIM6Q9C030 488 aaPredicted RBP3.19□□□□□ -1.9
VPS41-213ENST00000485955 KLHL4Q9C0H6 718 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 Q9H8V8 135 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 MED20Q9H944 212 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 TEX10Q9NXF1 929 aaPredicted RBP3.19□□□□□ -1.9
VPS41-213ENST00000485955 MAN1B1Q9UKM7 699 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 RPS6KL1Q9Y6S9 549 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 CEP170Q5SW79 1584 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 HCFC1P51610 2035 aa3.19□□□□□ -1.9
VPS41-213ENST00000485955 PTPRMP28827 1452 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 A0A1W2PPK0 400 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 SRRM5B3KS81 715 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 PTGESO14684 152 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 ADAM20O43506 726 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 IGHV3-13P01766 116 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 HLA-FP30511 346 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 PGFP49763 221 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 ITGA7Q13683 1181 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 PHKG1Q16816 387 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 GPR33Q49SQ1 333 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 MZT2BQ6NZ67 158 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 FRRS1Q6ZNA5 592 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 IL17RELQ6ZVW7 336 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 ADGRA1Q86SQ6 560 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 LINC00612Q8N6U2 182 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 KLHDC1Q8N7A1 406 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 OR7A2PQ8NGA2 310 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 OR10Q1Q8NGQ4 319 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 ARSGQ96EG1 525 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 DGAT2Q96PD7 388 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 RAB11FIP5Q9BXF6 653 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 STK26Q9P289 416 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 C19orf25Q9UFG5 118 aaPredicted RBP3.18□□□□□ -1.9
VPS41-213ENST00000485955 DDX25Q9UHL0 483 aaKnown RBP3.18□□□□□ -1.9
VPS41-213ENST00000485955 PPIEQ9UNP9 301 aaKnown RBP3.18□□□□□ -1.9
VPS41-213ENST00000485955 MADDQ8WXG6 1647 aa3.18□□□□□ -1.9
VPS41-213ENST00000485955 SYNJ1O43426 1573 aa3.17□□□□□ -1.9
VPS41-213ENST00000485955 A0A087WUV0 522 aaPredicted RBP3.17□□□□□ -1.9
VPS41-213ENST00000485955 TRBV5-5A0A0J9YX44 114 aa3.17□□□□□ -1.9
VPS41-213ENST00000485955 TEX28O15482 410 aa3.17□□□□□ -1.9
VPS41-213ENST00000485955 SPRY1O43609 319 aaPredicted RBP3.17□□□□□ -1.9
VPS41-213ENST00000485955 AHCYL1O43865 530 aa3.17□□□□□ -1.9
VPS41-213ENST00000485955 IRF2P14316 349 aa3.17□□□□□ -1.9
VPS41-213ENST00000485955 RPL35AP18077 110 aaKnown RBP3.17□□□□□ -1.9
VPS41-213ENST00000485955 CYP11B2P19099 503 aa3.17□□□□□ -1.9
VPS41-213ENST00000485955 TSFMP43897 325 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms