RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 STBD1O95210 358 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ATP6V1G2O95670 118 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PENKP01210 267 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 IL1BP01584 269 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 EIF2S1P05198 315 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 KRT19P08727 400 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SELLP14151 372 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CDH2P19022 906 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 EPORP19235 508 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 TAC1P20366 129 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 S100A1P23297 94 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 MYF6P23409 242 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CFL1P23528 166 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PSMA2P25787 234 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 GABRB3P28472 473 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CDH5P33151 784 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SPAM1P38567 509 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 GABRB2P47870 512 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC11A1P49279 550 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ANXA11P50995 505 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 HK3P52790 923 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 OAZ1P54368 228 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PEX3P56589 373 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SNAP25P60880 206 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 RPL7AP62424 266 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 EEF1A1P68104 462 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 NKX6-1P78426 367 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 EEF1A2Q05639 463 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SPP2Q13103 211 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SRSF5Q13243 272 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 DMP1Q13316 513 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 DYRK1AQ13627 763 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 NOMO1Q15155 1222 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PON2Q15165 354 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PARP6Q2NL67 630 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CCDC153Q494R4 210 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 NKAIN1Q4KMZ8 207 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 TMEM63BQ5T3F8 832 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 EEF1A1P5Q5VTE0 462 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ARHGEF16Q5VV41 709 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ARMC6Q6NXE6 501 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 AADACL2Q6P093 401 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC39A4Q6P5W5 647 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 NCEH1Q6PIU2 408 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ZNF365Q70YC5 407 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 GAREM2Q75VX8 874 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 MON1BQ7L1V2 547 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ASPGQ86U10 573 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 AMZ2Q86W34 360 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 NUDT13Q86X67 352 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ZNF573Q86YE8 665 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 RASAL3Q86YV0 1011 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CBWD2Q8IUF1 395 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ZDHHC17Q8IUH5 632 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 RHOT1Q8IXI2 618 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 BATF2Q8N1L9 274 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 GPD1LQ8N335 351 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ZCCHC9Q8N567 271 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC25A41Q8N5S1 370 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 KDM1BQ8NB78 822 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 NHLRC2Q8NBF2 726 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 AGBL3Q8NEM8 1001 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 TEX47Q8TBZ9 253 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 TAS1R2Q8TE23 839 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 MITD1Q8WV92 249 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 GLMPQ8WWB7 406 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CPT1BQ92523 772 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 GCDHQ92947 438 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 NT5C3BQ969T7 300 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 TMEM186Q96B77 213 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SAAL1Q96ER3 474 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ELMO2Q96JJ3 720 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 DGAT2Q96PD7 388 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PRMT1Q99873 361 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 EFHD1Q9BUP0 239 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 HTATIP2Q9BUP3 242 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SF3B5Q9BWJ5 86 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 TDRD3Q9H7E2 651 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ZNF703Q9H7S9 590 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 IL21RQ9HBE5 538 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC38A10Q9HBR0 1119 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 POLD4Q9HCU8 107 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 MRPL47Q9HD33 250 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 G6PC2Q9NQR9 355 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PRMT8Q9NR22 394 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CHRAC1Q9NRG0 131 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ARL8BQ9NVJ2 186 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 FAM118AQ9NWS6 357 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ZSCAN32Q9NX65 697 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PAQR5Q9NXK6 330 aaPredicted RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 DNAJB11Q9UBS4 358 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ZNF212Q9UDV6 495 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 ANAPC2Q9UJX6 822 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PTRH2Q9Y3E5 179 aaKnown RBP3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PLEKHM1Q9Y4G2 1056 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 PCDHAC2Q9Y5I4 1007 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 AP4B1Q9Y6B7 739 aa3.92□□□□□ -1.78
PRPF38B-205ENST00000485810 CNTNAP1P78357 1384 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms