RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 BRMS1LQ5PSV4 323 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 PLEKHS1Q5SXH7 462 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 TMEM211Q6ICI0 200 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 PPP1R2P3Q6NXS1 205 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 FIGNL1Q6PIW4 674 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 VHLLQ6RSH7 139 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 LIPIQ6XZB0 460 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 SPOCD1Q6ZMY3 1216 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 CDC20BQ86Y33 519 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 RBM12BQ8IXT5 1001 aaKnown RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 DEFB106AQ8N104 65 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 CATSPER1Q8NEC5 780 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 LRRC8CQ8TDW0 803 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 RSC1A1Q92681 617 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 NACC2Q96BF6 587 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 PTERQ96BW5 349 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 PPP1R14BQ96C90 147 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 CXorf40BQ96DE9 158 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 ERP27Q96DN0 273 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 PTCD3Q96EY7 689 aaKnown RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 THOC3Q96J01 351 aaKnown RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 SLC41A2Q96JW4 573 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 EXOC2Q96KP1 924 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 TAAR6Q96RI8 345 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 LMF1Q96S06 567 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 SLC30A3Q99726 388 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 GORASP1Q9BQQ3 440 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 BTBD10Q9BSF8 475 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 YIPF3Q9GZM5 350 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 DENND2DQ9H6A0 471 aaPredicted RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 SYNCQ9H7C4 482 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 ATP13A3Q9H7F0 1226 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 POT1Q9NUX5 634 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 BEX4Q9NWD9 120 aaPredicted RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 GPATCH2LQ9NWQ4 482 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 RAB20Q9NX57 234 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 SCOCQ9UIL1 159 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 NOCTQ9UK39 431 aaKnown RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 STAP1Q9ULZ2 295 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 KCNK6Q9Y257 313 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 STK38LQ9Y2H1 464 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 TMEM98Q9Y2Y6 226 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 MRPS2Q9Y399 296 aaKnown RBP6.11□□□□□ -1.43
CAPN13-206ENST00000485248 COQ4Q9Y3A0 265 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 MFHAS1Q9Y4C4 1052 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 HIVEP2P31629 2446 aa6.11□□□□□ -1.43
CAPN13-206ENST00000485248 C17orf113A0A1B0GUU1 675 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TSPAN11A1L157 253 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 E7EQ34 232 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 KLF11O14901 512 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TM9SF1O15321 606 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 GSC2O15499 205 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 RAMP2O60895 175 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 HTR3BO95264 441 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 ZBTB11O95625 1053 aaPredicted RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TP53P04637 393 aaPredicted RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CYP2A6P11509 494 aaPredicted RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CREB1P16220 341 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TBXAS1P24557 533 aaPredicted RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 MST1P26927 711 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 SLCO1A2P46721 670 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 ITGA8P53708 1063 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 BCL2L1Q07817 233 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CBWD6Q4V339 395 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 DCAF17Q5H9S7 520 aaPredicted RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CBWD3Q5JTY5 395 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CBWD5Q5RIA9 395 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CATSPEREQ5SY80 951 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 UBAP2Q5T6F2 1119 aaKnown RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 PRAMEF17Q5VTA0 474 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 FOXB2Q5VYV0 432 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 ACAD10Q6JQN1 1059 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 RWDD4Q6NW29 188 aaKnown RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TMEM154Q6P9G4 183 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 AAGABQ6PD74 315 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 GJB7Q6PEY0 223 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TMEM270Q6UE05 265 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 ADAMTSL4Q6UY14 1074 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 UNC5AQ6ZN44 842 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 DPPA4Q7L190 304 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 ENOSF1Q7L5Y1 443 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CLNKQ7Z7G1 428 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 GPR135Q8IZ08 494 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 ARHGAP24Q8N264 748 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 AFAP1L2Q8N4X5 818 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CPSF7Q8N684 471 aaKnown RBP6.1□□□□□ -1.43
CAPN13-206ENST00000485248 PPFIBP2Q8ND30 876 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 OR2Y1Q8NGV0 311 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 FNIP1Q8TF40 1166 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TRIM11Q96F44 468 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 LRRC46Q96FV0 321 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 Q96MF0 132 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 TUBGCP5Q96RT8 1024 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 CD180Q99467 661 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 VCX3BQ9H321 246 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 SYTL2Q9HCH5 934 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 VCX3AQ9NNX9 186 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 SLC6A20Q9NP91 592 aa6.1□□□□□ -1.43
CAPN13-206ENST00000485248 KCNK9Q9NPC2 374 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms