RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ENDOVQ8N8Q3 282 aaKnown RBP15.55■□□□□ 0.08
DDR1-246ENST00000485023 UHMK1Q8TAS1 419 aaKnown RBP15.55■□□□□ 0.08
DDR1-246ENST00000485023 TTC9Q92623 222 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 LRFN5Q96NI6 719 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 ZFYVE21Q9BQ24 234 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 PLCD4Q9BRC7 762 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 TRIM54Q9BYV2 358 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 SYNPO2LQ9H987 977 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 POPDC3Q9HBV1 291 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 KCND3Q9UK17 655 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 AP1M2Q9Y6Q5 423 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 C21orf140B9A014 251 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 H7BY64 318 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 ERVH48-1M5A8F1 160 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 HAT1O14929 419 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 ENO2P09104 434 aaPredicted RBP15.54■□□□□ 0.08
DDR1-246ENST00000485023 AGXTP21549 392 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 RPS15P62841 145 aaKnown RBP15.54■□□□□ 0.08
DDR1-246ENST00000485023 NAB1Q13506 487 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 LY6DQ14210 128 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 NAA25Q14CX7 972 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 TBR1Q16650 682 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 PPP1R3AQ16821 1122 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 ZXDCQ2QGD7 858 aaPredicted RBP15.54■□□□□ 0.08
DDR1-246ENST00000485023 DEFB109BQ30KR1 87 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 WASHC2DQ5SRD0 308 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 RHBDD2Q6NTF9 364 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 CEP128Q6ZU80 1094 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 RAPH1Q70E73 1250 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 FRA10AC1Q70Z53 315 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 PAQR7Q86WK9 346 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 GSPT2Q8IYD1 628 aaKnown RBP15.54■□□□□ 0.08
DDR1-246ENST00000485023 DTWD1Q8N5C7 304 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 TTC29Q8NA56 475 aaPredicted RBP15.54■□□□□ 0.08
DDR1-246ENST00000485023 PDLIM5Q96HC4 596 aaKnown RBP15.54■□□□□ 0.08
DDR1-246ENST00000485023 PRAP1Q96NZ9 151 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 EGFL8Q99944 293 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 ARHGAP9Q9BRR9 750 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 FAM129AQ9BZQ8 928 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 CTNNAL1Q9UBT7 734 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 SRPK3Q9UPE1 567 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 KLK4Q9Y5K2 254 aa15.54■□□□□ 0.08
DDR1-246ENST00000485023 NCF1BA6NI72 391 aaPredicted RBP15.53■□□□□ 0.08
DDR1-246ENST00000485023 NCF1CA8MVU1 366 aaPredicted RBP15.53■□□□□ 0.08
DDR1-246ENST00000485023 C9J4A7 227 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 ATXN7O15265 892 aaPredicted RBP15.53■□□□□ 0.08
DDR1-246ENST00000485023 CREG1O75629 220 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 PRB1P04280 392 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 FURINP09958 794 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 CCDC166P0CW27 439 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 NCF1P14598 390 aaPredicted RBP15.53■□□□□ 0.08
DDR1-246ENST00000485023 PTPN4P29074 926 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 AP1S2P56377 157 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 FOXL2P58012 376 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 RAB10P61026 200 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 ABATP80404 500 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 IL10RAQ13651 578 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 GRM7Q14831 915 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 TCTE1Q5JU00 501 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 TEX35Q5T0J7 233 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 MLIPQ5VWP3 458 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 ZNF385CQ66K41 422 aaPredicted RBP15.53■□□□□ 0.08
DDR1-246ENST00000485023 ZNF425Q6IV72 752 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 FBXO42Q6P3S6 717 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 ZNF517Q6ZMY9 492 aaPredicted RBP15.53■□□□□ 0.08
DDR1-246ENST00000485023 IFT20Q8IY31 132 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 EXT2Q93063 718 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 GBP5Q96PP8 586 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 CYTH2Q99418 400 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 CUTCQ9NTM9 273 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 ANKMY1Q9P2S6 941 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 SNX7Q9UNH6 387 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 FARSAQ9Y285 508 aaKnown RBP15.53■□□□□ 0.08
DDR1-246ENST00000485023 LOC400499M0QZD8 3231 aa15.53■□□□□ 0.08
DDR1-246ENST00000485023 H0YGG7 62 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 WISP3O95389 354 aaPredicted RBP15.52■□□□□ 0.08
DDR1-246ENST00000485023 MED26O95402 600 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 CAPN1P07384 714 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 FAM87AP0C7U9 286 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 CDH1P12830 882 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 ARF3P61204 181 aaPredicted RBP15.52■□□□□ 0.08
DDR1-246ENST00000485023 MC1RQ01726 317 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 ILF2Q12905 390 aaKnown RBP15.52■□□□□ 0.08
DDR1-246ENST00000485023 CSHL1Q14406 222 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 NCF4Q15080 339 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 ZKSCAN8Q15776 578 aaPredicted RBP15.52■□□□□ 0.08
DDR1-246ENST00000485023 HKDC1Q2TB90 917 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 C18orf21Q32NC0 220 aaPredicted RBP15.52■□□□□ 0.08
DDR1-246ENST00000485023 LINC00303Q3SY05 128 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 MROH9Q5TGP6 573 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 CAPN13Q6MZZ7 669 aaPredicted RBP15.52■□□□□ 0.08
DDR1-246ENST00000485023 ADAMTSL2Q86TH1 951 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 C17orf64Q86WR6 236 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 CSNK1A1LQ8N752 337 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 PROKR1Q8TCW9 393 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.52■□□□□ 0.08
DDR1-246ENST00000485023 FBXL8Q96CD0 374 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 TSNARE1Q96NA8 513 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 SGPP1Q9BX95 441 aa15.52■□□□□ 0.08
DDR1-246ENST00000485023 GPR87Q9BY21 358 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms