RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 HUS1BQ8NHY5 278 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 NRG4Q8WWG1 115 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 SLC13A3Q8WWT9 602 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 TMEM125Q96AQ2 219 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 SCARF2Q96GP6 870 aaPredicted RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 TSSK3Q96PN8 268 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 FERD3LQ96RJ6 166 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 INSM2Q96T92 566 aaPredicted RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 HAUS8Q9BT25 410 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 EBPLQ9BY08 206 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 CARS2Q9HA77 564 aaKnown RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 POLMQ9NP87 494 aaPredicted RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 GEMIN8Q9NWZ8 242 aaKnown RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 SLAMF8Q9P0V8 285 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 PCDHA9Q9Y5H5 950 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 PIPSLA2A3N6 862 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 H0Y8X5 98 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 PCSK2P16519 638 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 IDSP22304 550 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 CLNS1AP54105 237 aaKnown RBP16.13■□□□□ 0.17
CTSA-207ENST00000484855 CLDN8P56748 225 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 NFATC4Q14934 902 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 HIST2H2ACQ16777 129 aaPredicted RBP16.13■□□□□ 0.17
CTSA-207ENST00000484855 C6orf10Q5SRN2 563 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 HIST2H2AA3Q6FI13 130 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 SPATA24Q86W54 205 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 HLA-CQ95604 372 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 FCRL1Q96LA6 429 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 OR2M4Q96R27 311 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 IMP3Q9NV31 184 aaKnown RBP16.13■□□□□ 0.17
CTSA-207ENST00000484855 C15orf38-AP3S2A0A0A6YYH1 394 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 PDZK1P1A8MUH7 402 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 SCAMP1O15126 338 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 STAMBPO95630 424 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 SEMA4FO95754 770 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 PGRP06401 933 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 CDH1P12830 882 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 TACR1P25103 407 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 YBX1P67809 324 aaKnown RBP16.13■□□□□ 0.17
CTSA-207ENST00000484855 TFF2Q03403 129 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 ACSM2AQ08AH3 577 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 LAPTM5Q13571 262 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 CYP2A13Q16696 494 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 WLSQ5T9L3 541 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 ACSM2BQ68CK6 577 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 ENPP7Q6UWV6 458 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 ZNF852Q6ZMS4 543 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 ARPINQ7Z6K5 226 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 KIAA2013Q8IYS2 634 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 RAB42Q8N4Z0 105 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 RSRC1Q96IZ7 334 aaKnown RBP16.13■□□□□ 0.17
CTSA-207ENST00000484855 MENTQ9BUN1 341 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 TRIM8Q9BZR9 551 aa16.13■□□□□ 0.17
CTSA-207ENST00000484855 USP36Q9P275 1121 aaKnown RBP16.13■□□□□ 0.17
CTSA-207ENST00000484855 GMPR2Q9P2T1 348 aaKnown RBP16.13■□□□□ 0.17
CTSA-207ENST00000484855 LRP4O75096 1905 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 PRR19A6NJB7 356 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 H3BNX3 289 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 ETHE1O95571 254 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 HSD17B1P14061 328 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 RPS13P62277 151 aaKnown RBP16.12■□□□□ 0.17
CTSA-207ENST00000484855 MEF2AQ02078 507 aaPredicted RBP16.12■□□□□ 0.17
CTSA-207ENST00000484855 MAPKAPK3Q16644 382 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 SPATS1Q496A3 300 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 RABL3Q5HYI8 236 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 C10orf62Q5T681 223 aaPredicted RBP16.12■□□□□ 0.17
CTSA-207ENST00000484855 ZFP1Q6P2D0 407 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 PRR23BQ6ZRT6 265 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 LAS2Q8IYD9 372 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 PDXPQ96GD0 296 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 METTL2AQ96IZ6 378 aaKnown RBP16.12■□□□□ 0.17
CTSA-207ENST00000484855 WDR92Q96MX6 357 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 NRTNQ99748 197 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 ACAT2Q9BWD1 397 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 EBF1Q9UH73 591 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 TAC3Q9UHF0 121 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 CA14Q9ULX7 337 aa16.12■□□□□ 0.17
CTSA-207ENST00000484855 RUVBL1Q9Y265 456 aaKnown RBP16.12■□□□□ 0.17
CTSA-207ENST00000484855 SH3BGRLO75368 114 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 MYO1DO94832 1006 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 KCNH1O95259 989 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 DGKEP52429 567 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 PLIN5Q00G26 463 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 PWP1Q13610 501 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 CLCA4Q14CN2 919 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 NANOGP8Q6NSW7 305 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 DLEU7Q6UYE1 221 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 C17orf64Q86WR6 236 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 HID1Q8IV36 788 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 OR1E3Q8WZA6 343 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 SMPDL3AQ92484 453 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 SH3KBP1Q96B97 665 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 BMFQ96LC9 184 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 SPNS1Q9H2V7 528 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 NANOGQ9H9S0 305 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 FANCMQ8IYD8 2048 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 DNAJA2O60884 412 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 CHRNB1P11230 501 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 HTR1BP28222 390 aa16.11■□□□□ 0.17
CTSA-207ENST00000484855 AKT2P31751 481 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms