RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PCDHGA7Q9Y5G6 932 aa25.36■■□□□ 1.65
SHOX2-204ENST00000483851 KDM1AO60341 852 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 EEDO75530 441 aaKnown RBP25.35■■□□□ 1.65
SHOX2-204ENST00000483851 IGHV4-34P06331 123 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 RABIFP47224 123 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 NEK2P51955 445 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 THOP1P52888 689 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 HIST2H2ACQ16777 129 aaPredicted RBP25.35■■□□□ 1.65
SHOX2-204ENST00000483851 VPS26BQ4G0F5 336 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 HIST2H2AA3Q6FI13 130 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 TMPRSS11BQ86T26 416 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 SLC26A7Q8TE54 656 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 TOE1Q96GM8 510 aaKnown RBP25.35■■□□□ 1.65
SHOX2-204ENST00000483851 TEX37Q96LM6 180 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 ACTL8Q9H568 366 aa25.35■■□□□ 1.65
SHOX2-204ENST00000483851 LEF1Q9UJU2 399 aaPredicted RBP25.35■■□□□ 1.65
SHOX2-204ENST00000483851 KRBA1A5PL33 1030 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 CCDC154A6NI56 674 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 BAG2O95816 211 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 CD6P30203 668 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 PRPF38BQ5VTL8 546 aaKnown RBP25.34■■□□□ 1.65
SHOX2-204ENST00000483851 NXPE4Q6UWF7 544 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 LAS2Q8IYD9 372 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 DEFB123Q8N688 67 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 OR7G3Q8NG95 312 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 OR1E3Q8WZA6 343 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 FCRL1Q96LA6 429 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 FERD3LQ96RJ6 166 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 ZBTB18Q99592 522 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 SPAG4Q9NPE6 437 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 VPS29Q9UBQ0 182 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 FBXL21Q9UKT6 434 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 CYP8B1Q9UNU6 501 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 CEACAM7Q14002 265 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 UBXN2BQ14CS0 331 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 USP39Q53GS9 565 aaKnown RBP25.34■■□□□ 1.65
SHOX2-204ENST00000483851 ABRAXAS1Q6UWZ7 409 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 RETREG3Q86VR2 466 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 MINDY1Q8N5J2 469 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 C6orf106Q9H6K1 298 aaPredicted RBP25.34■■□□□ 1.65
SHOX2-204ENST00000483851 MAP10Q9P2G4 905 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 PCOLCE2Q9UKZ9 415 aa25.34■■□□□ 1.65
SHOX2-204ENST00000483851 FOXE1O00358 373 aaPredicted RBP25.33■■□□□ 1.65
SHOX2-204ENST00000483851 CFLARO15519 480 aa25.33■■□□□ 1.65
SHOX2-204ENST00000483851 ZP2Q05996 745 aa25.33■■□□□ 1.65
SHOX2-204ENST00000483851 GAS6Q14393 721 aa25.33■■□□□ 1.65
SHOX2-204ENST00000483851 SPATS1Q496A3 300 aa25.33■■□□□ 1.65
SHOX2-204ENST00000483851 THEMIS2Q5TEJ8 643 aa25.33■■□□□ 1.65
SHOX2-204ENST00000483851 PRR23BQ6ZRT6 265 aa25.33■■□□□ 1.65
SHOX2-204ENST00000483851 GPATCH1Q9BRR8 931 aaKnown RBP25.33■■□□□ 1.65
SHOX2-204ENST00000483851 TRNAU1APQ9NX07 287 aaKnown RBP25.33■■□□□ 1.65
SHOX2-204ENST00000483851 BCAP29Q9UHQ4 241 aa25.33■■□□□ 1.65
SHOX2-204ENST00000483851 FAM170BA6NMN3 283 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 H0Y8X5 98 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 TMEM31Q5JXX7 168 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 IRGCQ6NXR0 463 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 SUSD1Q6UWL2 747 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 GJD3Q8N144 294 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 LIX1Q8N485 282 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 PDXPQ96GD0 296 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 CAMK1GQ96NX5 476 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 IL17FQ96PD4 163 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 PITHD1Q9GZP4 211 aaPredicted RBP25.32■■□□□ 1.64
SHOX2-204ENST00000483851 CXorf56Q9H5V9 222 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 PPT2Q9UMR5 302 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 CFAP20Q9Y6A4 193 aaKnown RBP25.32■■□□□ 1.64
SHOX2-204ENST00000483851 PDZK1P1A8MUH7 402 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 CASQ2O14958 399 aaPredicted RBP25.32■■□□□ 1.64
SHOX2-204ENST00000483851 BCKDHAP12694 445 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 AMD1P17707 334 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 ME2P23368 584 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 VARSP26640 1264 aaKnown RBP25.32■■□□□ 1.64
SHOX2-204ENST00000483851 NDUFS1P28331 727 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 IL12AP29459 219 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 RAB28P51157 221 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 TSTA3Q13630 321 aaPredicted RBP25.32■■□□□ 1.64
SHOX2-204ENST00000483851 CLCA4Q14CN2 919 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 DPP10Q8N608 796 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 ECSITQ9BQ95 431 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 DPY30Q9C005 99 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 CHRDQ9H2X0 955 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 PELI2Q9HAT8 420 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 GEMIN8Q9NWZ8 242 aaKnown RBP25.32■■□□□ 1.64
SHOX2-204ENST00000483851 PACSIN3Q9UKS6 424 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 PLEKHM1Q9Y4G2 1056 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 DGKBQ9Y6T7 804 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 COLEC10Q9Y6Z7 277 aa25.32■■□□□ 1.64
SHOX2-204ENST00000483851 XRCC1P18887 633 aaPredicted RBP25.31■■□□□ 1.64
SHOX2-204ENST00000483851 CLDN8P56748 225 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 TFF2Q03403 129 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 TLR1Q15399 786 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 CATSPEREQ5SY80 951 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 C17orf64Q86WR6 236 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 PCED1AQ9H1Q7 454 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 IMP3Q9NV31 184 aaKnown RBP25.31■■□□□ 1.64
SHOX2-204ENST00000483851 TMEM181Q9P2C4 612 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 ADGRE2Q9UHX3 823 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 RUVBL1Q9Y265 456 aaKnown RBP25.31■■□□□ 1.64
SHOX2-204ENST00000483851 CA5BQ9Y2D0 317 aa25.31■■□□□ 1.64
SHOX2-204ENST00000483851 TRIM38O00635 465 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms