RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PLCD4Q9BRC7 762 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 CRB3Q9BUF7 120 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 CUEDC1Q9NWM3 386 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-221ENST00000483778 SPATA7Q9P0W8 599 aa17.17■□□□□ 0.34
ATG4B-221ENST00000483778 NOVA2Q9UNW9 492 aaKnown RBP17.17■□□□□ 0.34
ATG4B-221ENST00000483778 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ANKUB1A6NFN9 424 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 MYO1CO00159 1063 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 AP3B1O00203 1094 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 IPO13O94829 963 aaKnown RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 KRT14P02533 472 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 STATHP02808 62 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 CCDC175P0C221 793 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 VARSP26640 1264 aaKnown RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ATP5DP30049 168 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 CMPK1P30085 196 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ADARP55265 1226 aaKnown RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 CCZ1BP86790 482 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 CCZ1P86791 482 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 AGAP7PQ5VUJ5 663 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF425Q6IV72 752 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 CASC4Q6P4E1 433 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 LINC00696Q6ZRV3 163 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 KCNMB4Q86W47 210 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 LRRC8AQ8IWT6 810 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ARHGEF39Q8N4T4 335 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 DNAJB14Q8TBM8 379 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 SMPDL3AQ92484 453 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 PSMF1Q92530 271 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 AGAP4Q96P64 663 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ZFYVE21Q9BQ24 234 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 WDR77Q9BQA1 342 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 LHPPQ9H008 270 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF160Q9HCG1 818 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 MRPS30Q9NP92 439 aaKnown RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 FBXO6Q9NRD1 293 aaPredicted RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 SEMA3GQ9NS98 782 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ABCF3Q9NUQ8 709 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 C3orf18Q9UK00 162 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 RUVBL1Q9Y265 456 aaKnown RBP17.16■□□□□ 0.34
ATG4B-221ENST00000483778 NEU2Q9Y3R4 380 aa17.16■□□□□ 0.34
ATG4B-221ENST00000483778 ZCWPW2A0A1B0GU75 182 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 SLC16A8O95907 504 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 CELA2AP08217 269 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 OGNP20774 298 aaKnown RBP17.15■□□□□ 0.34
ATG4B-221ENST00000483778 RPA3P35244 121 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-221ENST00000483778 PNLIPRP1P54315 467 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 DHX34Q14147 1143 aaKnown RBP17.15■□□□□ 0.34
ATG4B-221ENST00000483778 SYT16Q17RD7 645 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF787Q6DD87 383 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF470Q6ECI4 717 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 FAAH2Q6GMR7 532 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 PLD3Q8IV08 490 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 RAB42Q8N4Z0 105 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 AMER3Q8N944 861 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 MAGEC3Q8TD91 643 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 GRHL3Q8TE85 626 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF480Q8WV37 535 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF669Q96BR6 464 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-221ENST00000483778 MIEF2Q96C03 454 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 OR2A5Q96R48 311 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 ZNF282Q9UDV7 671 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-221ENST00000483778 TAC3Q9UHF0 121 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 NXT1Q9UKK6 140 aaKnown RBP17.15■□□□□ 0.34
ATG4B-221ENST00000483778 MRPS2Q9Y399 296 aaKnown RBP17.15■□□□□ 0.34
ATG4B-221ENST00000483778 FAM169AQ9Y6X4 670 aa17.15■□□□□ 0.34
ATG4B-221ENST00000483778 IGLV3-12A0A075B6K2 115 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 FAM237BA0A1B0GVD1 139 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 E7ENX8 843 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 H3BMM5 538 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 P2RX6O15547 441 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 FOXS1O43638 330 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 USP1O94782 785 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 DDAH2O95865 285 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 FBLP22087 321 aaKnown RBP17.14■□□□□ 0.33
ATG4B-221ENST00000483778 TAP2Q03519 686 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 OCA2Q04671 838 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 PRDX1Q06830 199 aaKnown RBP17.14■□□□□ 0.33
ATG4B-221ENST00000483778 RNF187Q5TA31 235 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-221ENST00000483778 ICE2Q659A1 982 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 PRMT9Q6P2P2 845 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 LRRC56Q8IYG6 542 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-221ENST00000483778 CSNK1A1LQ8N752 337 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 PPP4R1Q8TF05 950 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 ASB11Q8WXH4 323 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 TM9SF4Q92544 642 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 MAGOHBQ96A72 148 aaKnown RBP17.14■□□□□ 0.33
ATG4B-221ENST00000483778 CABS1Q96KC9 395 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 CNDP1Q96KN2 507 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 PLA2G3Q9NZ20 509 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 MRFAP1Q9Y605 127 aa17.14■□□□□ 0.33
ATG4B-221ENST00000483778 SDR42E2A6NKP2 422 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 GOLGA6L6A8MZA4 724 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 E5RI56 91 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 GFYI3L273 518 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 E2F3O00716 465 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 KIF5CO60282 957 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 KLHL41O60662 606 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 HAUS5O94927 633 aa17.13■□□□□ 0.33
ATG4B-221ENST00000483778 HPP00738 406 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms