RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SERHLQ9NQF3 203 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 BATF3Q9NR55 127 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 SIRT5Q9NXA8 310 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 SLC25A37Q9NYZ2 338 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 ACSL5Q9ULC5 683 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 SH2B3Q9UQQ2 575 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 SLC17A4Q9Y2C5 497 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 TSC22D4Q9Y3Q8 395 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 TRPM6Q9BX84 2022 aa12.79□□□□□ -0.36
CPNE1-225ENST00000483495 A0A096LPI6 279 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 DHRS12A0PJE2 317 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 RNGTTO60942 597 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ETHE1O95571 254 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 GPIP06744 558 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 POU3F3P20264 500 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 HSD17B2P37059 387 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 MTPNP58546 118 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 MRPS21P82921 87 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 LAPTM5Q13571 262 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 CYP2A13Q16696 494 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 RUNDC3AQ59EK9 446 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PAGE2BQ5JRK9 111 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 CATSPEREQ5SY80 951 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 CAPRIN2Q6IMN6 1127 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 NXPE4Q6UWF7 544 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 LCTLQ6UWM7 567 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 USP30Q70CQ3 517 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 IFNEQ86WN2 208 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 CHTF18Q8WVB6 975 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 LRTOMTQ8WZ04 291 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 EGLN2Q96KS0 407 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 CCDC115Q96NT0 180 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 NR1H4Q96RI1 486 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 SH3GL1Q99961 368 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 TIMM29Q9BSF4 260 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 OSBPL6Q9BZF3 934 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PAIP1Q9H074 479 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 SLC6A17Q9H1V8 727 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 RMND5AQ9H871 391 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 GEMIN8Q9NWZ8 242 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 MAGEL2Q9UJ55 1249 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PIAS3Q9Y6X2 628 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 KANSL1LA0AUZ9 987 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PRR19A6NJB7 356 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 FUCA1P04066 466 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 UMPSP11172 480 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 UQCRBP14927 111 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 HRH2P25021 359 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PSMA4P25789 261 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PTPN6P29350 595 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 IGFALSP35858 605 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 OR4D2P58180 307 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 KLC1Q07866 573 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ACSM2AQ08AH3 577 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 DDX39BQ13838 428 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 BLMHQ13867 455 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 SLBPQ14493 270 aaKnown RBP eCLIP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 SPIN4Q56A73 249 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ACSM2BQ68CK6 577 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ADNP2Q6IQ32 1131 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 GALNT18Q6P9A2 607 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ERMP1Q7Z2K6 904 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PAPD5Q8NDF8 572 aaKnown RBP12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ICA1LQ8NDH6 482 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 KLK6Q92876 244 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ITCHQ96J02 903 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 ZNF583Q96ND8 569 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 HAUS8Q9BT25 410 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 MENTQ9BUN1 341 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 CD207Q9UJ71 328 aa12.78□□□□□ -0.36
CPNE1-225ENST00000483495 PIPSLA2A3N6 862 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 H0YJX3 145 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 HNRNPRO43390 633 aaKnown RBP12.77□□□□□ -0.37
CPNE1-225ENST00000483495 KCNJ13O60928 360 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 MYO1DO94832 1006 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 CEACAM5P06731 702 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 MTHFD1P11586 935 aaKnown RBP12.77□□□□□ -0.37
CPNE1-225ENST00000483495 PCNAP12004 261 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 BMP2P12643 396 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
CPNE1-225ENST00000483495 CYP4F3Q08477 520 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 HIST2H2ACQ16777 129 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-225ENST00000483495 PRAMEF14Q5SWL7 426 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 PRAMEF13Q5VWM6 474 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 HIST2H2AA3Q6FI13 130 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 HMBOX1Q6NT76 420 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 SYT12Q8IV01 421 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D21Q8IYX1 336 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 ANKFN1Q8N957 763 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 STARD8Q92502 1023 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-225ENST00000483495 GATA6Q92908 595 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 UBE2E3Q969T4 207 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms