RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 NPPBP16860 134 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 STAT5AP42229 794 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 TGFBIQ15582 683 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 OR4D1Q15615 310 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 FAM83EQ2M2I3 478 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 ZXDCQ2QGD7 858 aaPredicted RBP20.05■□□□□ 0.8
SEC13-217ENST00000482647 ZNF425Q6IV72 752 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 FBXO42Q6P3S6 717 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 LCTLQ6UWM7 567 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 ADCK2Q7Z695 626 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 SLC38A9Q8NBW4 561 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 PTERQ96BW5 349 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 PYCR2Q96C36 320 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 PRAP1Q96NZ9 151 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 ZFYVE21Q9BQ24 234 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 DHRS4Q9BTZ2 278 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 EFHD1Q9BUP0 239 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 GPN2Q9H9Y4 310 aaPredicted RBP20.05■□□□□ 0.8
SEC13-217ENST00000482647 LHX9Q9NQ69 397 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 IGSF5Q9NSI5 407 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 TMEM184CQ9NVA4 438 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 FETUBQ9UGM5 382 aa20.05■□□□□ 0.8
SEC13-217ENST00000482647 SDK2Q58EX2 2172 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 A0A0J9YVX5 310 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 H3BMH7 237 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 CTSBP07858 339 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 EZRP15311 586 aaKnown RBP20.04■□□□□ 0.8
SEC13-217ENST00000482647 CSRP3P50461 194 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 VSNL1P62760 191 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 CDKL4Q5MAI5 379 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 RNF44Q7L0R7 432 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 ISCA2Q86U28 154 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 C17orf64Q86WR6 236 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 CNPY4Q8N129 248 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 TCAIMQ8N3R3 496 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 ZNF655Q8N720 491 aaPredicted RBP20.04■□□□□ 0.8
SEC13-217ENST00000482647 UBLCP1Q8WVY7 318 aaPredicted RBP20.04■□□□□ 0.8
SEC13-217ENST00000482647 NDC1Q9BTX1 674 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 VPS11Q9H270 941 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 EPB41L4BQ9H329 900 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 ALG9Q9H6U8 611 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 ENAMQ9NRM1 1142 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 RNF112Q9ULX5 631 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 SRPK3Q9UPE1 567 aa20.04■□□□□ 0.8
SEC13-217ENST00000482647 LOC101059948A0A1B0GTJ6 334 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 CCDC189A1A4V9 331 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 MEN1O00255 615 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 S100BP04271 92 aaPredicted RBP20.03■□□□□ 0.8
SEC13-217ENST00000482647 SNRPAP09012 282 aaKnown RBP20.03■□□□□ 0.8
SEC13-217ENST00000482647 LIFP15018 202 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 TFEBP19484 476 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 GMPRP36959 345 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 VSX2P58304 361 aaPredicted RBP20.03■□□□□ 0.8
SEC13-217ENST00000482647 CXADRP78310 365 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 DLG1Q12959 904 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 GPS2Q13227 327 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 GRM7Q14831 915 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 COL28A1Q2UY09 1125 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 PTCHD3Q3KNS1 767 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 WDR93Q6P2C0 686 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 KLC3Q6P597 504 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 ADGRD1Q6QNK2 874 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 ZSCAN1Q8NBB4 408 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 KCTD4Q8WVF5 259 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 ISL2Q96A47 359 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 RHBDF1Q96CC6 855 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 NXNL1Q96CM4 212 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 MTBPQ96DY7 904 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 ZNF285Q96NJ3 590 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 DPH2Q9BQC3 489 aaPredicted RBP20.03■□□□□ 0.8
SEC13-217ENST00000482647 CPNE5Q9HCH3 593 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 PCMTD2Q9NV79 361 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 CUEDC1Q9NWM3 386 aaPredicted RBP20.03■□□□□ 0.8
SEC13-217ENST00000482647 CD274Q9NZQ7 290 aa20.03■□□□□ 0.8
SEC13-217ENST00000482647 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.03■□□□□ 0.8
SEC13-217ENST00000482647 V9GYY5 206 aaPredicted RBP20.03■□□□□ 0.8
SEC13-217ENST00000482647 KMT2BQ9UMN6 2715 aaPredicted RBP20.03■□□□□ 0.8
SEC13-217ENST00000482647 ADAMTS20P59510 1910 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 NCF1BA6NI72 391 aaPredicted RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 NCF1CA8MVU1 366 aaPredicted RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 TRIM49D1C9J1S8 452 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 EFSO43281 561 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 NRP2O60462 931 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 KLHL2O95198 593 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 NCF1P14598 390 aaPredicted RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 RORAP35398 523 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 DLSTP36957 453 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 MAGEA12P43365 314 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 ARSFP54793 590 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 IRF9Q00978 393 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 VAC14Q08AM6 782 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 SRSF6Q13247 344 aaKnown RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 ACAP2Q15057 778 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 WASHC2DQ5SRD0 308 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 YOD1Q5VVQ6 348 aaPredicted RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 SULT1C3Q6IMI6 304 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 FRMPD2BQ6IN97 320 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 RHBDD2Q6NTF9 364 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 THOC6Q86W42 341 aaKnown RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 DSELQ8IZU8 1212 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms