RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 HECTD1Q9ULT8 2610 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 FITM1A5D6W6 292 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 E7ENX8 843 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 AGPSO00116 658 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 CES2O00748 559 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 SOCS6O14544 535 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 P2RX6O15547 441 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 MPC1LP0DKB6 136 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 ENO3P13929 434 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 FBLP22087 321 aaKnown RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 GNLYP22749 145 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 IMPA1P29218 277 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 CARSP49589 748 aaKnown RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 CDKN2DP55273 166 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 MRPS25P82663 173 aaKnown RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 DR1Q01658 176 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 TAP2Q03519 686 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 RBBP7Q16576 425 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 YOD1Q5VVQ6 348 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 NEK10Q6ZWH5 1172 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 PAQR7Q86WK9 346 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 LMNTD2Q8IXW0 634 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 GPATCH11Q8N954 259 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 Q8NA96 180 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 C2CD4AQ8NCU7 369 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 EEF1AKMT1Q8WVE0 214 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 ASB11Q8WXH4 323 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 INPP5DQ92835 1189 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 C8orf44Q96CB5 159 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 LINGO1Q96FE5 620 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 CERS2Q96G23 380 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 IP6K3Q96PC2 410 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 SMAD5Q99717 465 aaKnown RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 EBNA1BP2Q99848 306 aaKnown RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 WDR83Q9BRX9 315 aaKnown RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 CRB3Q9BUF7 120 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 YIPF2Q9BWQ6 316 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 WDR54Q9H977 334 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 ZBTB20Q9HC78 741 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 ZNF304Q9HCX3 659 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 SLAMF7Q9NQ25 335 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 SH2B3Q9UQQ2 575 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 RUVBL1Q9Y265 456 aaKnown RBP9.99□□□□□ -0.81
CPSF4-212ENST00000482251 KLK4Q9Y5K2 254 aa9.99□□□□□ -0.81
CPSF4-212ENST00000482251 DOPEY2Q9Y3R5 2298 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ZNF839A8K0R7 811 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 TTI1O43156 1089 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ZBTB14O43829 449 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 SRPX2O60687 465 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 VPS4BO75351 444 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 CCNDBP1O95273 360 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ALPPP05187 535 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 CD63P08962 238 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 PIM1P11309 404 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 EZRP15311 586 aaKnown RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 MMP11P24347 488 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 GABRB3P28472 473 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ELK3P41970 407 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ITGA8P53708 1063 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 SNRPNP63162 240 aaKnown RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 TIAL1Q01085 375 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 PRDX1Q06830 199 aaKnown RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 KLC1Q07866 573 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 SRSF1Q07955 248 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■■■■□ 23.2
CPSF4-212ENST00000482251 MYBPC3Q14896 1274 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ARHGAP19Q14CB8 494 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 NAA25Q14CX7 972 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 SYT16Q17RD7 645 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 MUM1Q2TAK8 710 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 PRTGQ2VWP7 1150 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 VWA2Q5GFL6 755 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 SPANXN3Q5MJ09 141 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 PRAMEF13Q5VWM6 474 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 FAAH2Q6GMR7 532 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ZNF425Q6IV72 752 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 FBXO42Q6P3S6 717 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 TRMT10BQ6PF06 316 aaKnown RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 PAQR3Q6TCH7 311 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 CYHR1Q6ZMK1 362 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ANKMY2Q8IV38 441 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 PARP9Q8IXQ6 854 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 LRRC56Q8IYG6 542 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 STT3BQ8TCJ2 826 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 RERGQ96A58 199 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 MIEF2Q96C03 454 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 NAPGQ99747 312 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ATG10Q9H0Y0 220 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 SLC26A1Q9H2B4 701 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ZNF552Q9H707 407 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 PLAC1Q9HBJ0 212 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 CCDC177Q9NQR7 707 aaPredicted RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 ANKMY1Q9P2S6 941 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 NXT1Q9UKK6 140 aaKnown RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 VPS4AQ9UN37 437 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 MRPS2Q9Y399 296 aaKnown RBP9.98□□□□□ -0.81
CPSF4-212ENST00000482251 CSAG2Q9Y5P2 127 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 COMMD10Q9Y6G5 202 aa9.98□□□□□ -0.81
CPSF4-212ENST00000482251 MDC1Q14676 2089 aaKnown RBP9.97□□□□□ -0.81
CPSF4-212ENST00000482251 ANKRD12Q6UB98 2062 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms