RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 RALGPS2Q86X27 583 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-216ENST00000481242 PRSS58Q8IYP2 241 aa9.23□□□□□ -0.93
GARNL3-216ENST00000481242 ELOA3Q8NG57 546 aa9.23□□□□□ -0.93
GARNL3-216ENST00000481242 PLEKHO2Q8TD55 490 aa9.23□□□□□ -0.93
GARNL3-216ENST00000481242 CCDC59Q9P031 241 aaKnown RBP9.23□□□□□ -0.93
GARNL3-216ENST00000481242 AJAP1Q9UKB5 411 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-216ENST00000481242 A8MT66 165 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 BCKDKO14874 412 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 NDUFS4O43181 175 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RGS10O43665 173 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RENP00797 406 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SERPINA3P01011 423 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RAP2AP10114 183 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 IDH3AP50213 366 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 Q6ZVL8 140 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SPPL2CQ8IUH8 684 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RELL1Q8IUW5 271 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 UXS1Q8NBZ7 420 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 OR10A6Q8NH74 314 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 DDX1Q92499 740 aaKnown RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 IMP4Q96G21 291 aaKnown RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 GPER1Q99527 375 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 EBPLQ9BY08 206 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 TEX264Q9Y6I9 313 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RGPD8O14715 1765 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 EIF3FO00303 357 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 GADD45GO95257 159 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 NPPAP01160 153 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SYPP08247 313 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 HOXD13P35453 343 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 LMAN2Q12907 356 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 DHCR24Q15392 516 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 FAM189A2Q15884 450 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 ATG14Q6ZNE5 492 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 TMEM125Q96AQ2 219 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PLEKHA1Q9HB21 404 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 DNAJB9Q9UBS3 223 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PACSIN3Q9UKS6 424 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SLC22A14Q9Y267 594 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 MRPS7Q9Y2R9 242 aaKnown RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 TOPAZ1Q8N9V7 1692 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 ADAMTS3O15072 1205 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 LEFTY1O75610 366 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 STC2O76061 302 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 HSD3B1P14060 373 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PRKCHP24723 683 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 HSD3B2P26439 372 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 GATMP50440 423 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 DSTNP60981 165 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 HNRNPKP61978 463 aaKnown RBP eCLIP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 KLHL22Q53GT1 634 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 POMZP3Q6PJE2 187 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 ZNF366Q8N895 744 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 HPS1Q92902 700 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 BORCS6Q96GS4 357 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 NOL6Q9H6R4 1146 aaKnown RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PTGES2Q9H7Z7 377 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 MARCH7Q9H992 704 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SPATA2Q9UM82 520 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 DHRS7Q9Y394 339 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PCDHGB1Q9Y5G3 927 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SLC30A4O14863 429 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 AHSGP02765 367 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 DRD1P21728 446 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PROZP22891 400 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 CXCR1P25024 350 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 HOXA11P31270 313 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RPS9P46781 194 aaKnown RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SGCBQ16585 318 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PTCHD3Q3KNS1 767 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SLC36A4Q6YBV0 504 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 C15orf39Q6ZRI6 1047 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 ZDHHC21Q8IVQ6 265 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PQLC3Q8N755 202 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RASGEF1AQ8N9B8 481 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 FIBINQ8TAL6 211 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 TSPEARQ8WU66 669 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PNPLA2Q96AD5 504 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 RANBP9Q96S59 729 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 KCNH6Q9H252 994 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 DENND2DQ9H6A0 471 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 FARSBQ9NSD9 589 aaKnown RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 SPATA6Q9NWH7 488 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 HSFX1Q9UBD0 423 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PRODH2Q9UF12 536 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 WBP11Q9Y2W2 641 aaKnown RBP9.22□□□□□ -0.93
GARNL3-216ENST00000481242 PCDHGB5Q9Y5G0 923 aa9.22□□□□□ -0.93
GARNL3-216ENST00000481242 FAM92AA1XBS5 289 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 OR51F1A6NGY5 319 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 SCDO00767 359 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 TIPRLO75663 272 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 PRKCGP05129 697 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 CLCN4P51793 760 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 RAB25P57735 213 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 PPP3R1P63098 170 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 OGDHQ02218 1023 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 NFATC2Q13469 925 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 UAP1L1Q3KQV9 507 aa9.21□□□□□ -0.93
GARNL3-216ENST00000481242 SLC8B1Q6J4K2 584 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms