RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 PRRG2O14669 202 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 OR1I1O60431 355 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 OR56A5P0C7T3 313 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 CCR7P32248 378 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 CD96P40200 585 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 ATP5OP48047 213 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 HSPA14Q0VDF9 509 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 FASTKQ14296 549 aaKnown RBP16.41■□□□□ 0.22
HMGN1-212ENST00000479586 SPINK14Q6IE38 97 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 CEP128Q6ZU80 1094 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 GALNTL5Q7Z4T8 443 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 ZC3H7AQ8IWR0 971 aaKnown RBP16.41■□□□□ 0.22
HMGN1-212ENST00000479586 DMRTC2Q8IXT2 367 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-212ENST00000479586 MARVELD2Q8N4S9 558 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 OR2L3Q8NG85 312 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 MMABQ96EY8 250 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-212ENST00000479586 BPIFA3Q9BQP9 254 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 UCK2Q9BZX2 261 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 TGIF2Q9GZN2 237 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 NAT10Q9H0A0 1025 aaKnown RBP16.41■□□□□ 0.22
HMGN1-212ENST00000479586 SYNPO2LQ9H987 977 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 ARNT2Q9HBZ2 717 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 MKKSQ9NPJ1 570 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-212ENST00000479586 DLL4Q9NR61 685 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 SLC39A10Q9ULF5 831 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 CDC14AQ9UNH5 594 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 KLK4Q9Y5K2 254 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 H0YGG7 62 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 MAN1A2O60476 641 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 FKBP9O95302 570 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 RPN2P04844 631 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 C8orf89P0DMQ9 161 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 TPH1P17752 444 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 COMTP21964 271 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 SLC26A3P40879 764 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 ARF3P61204 181 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-212ENST00000479586 YBX1P67809 324 aaKnown RBP16.4■□□□□ 0.22
HMGN1-212ENST00000479586 PRPSAP1Q14558 356 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 BTBD16Q32M84 506 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 RNFT1Q5M7Z0 435 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 ANKRD20A2Q5SQ80 823 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 ANKRD20A1Q5TYW2 823 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 ANKRD20A3Q5VUR7 823 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 LANCL3Q6ZV70 420 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-212ENST00000479586 TAB3Q8N5C8 712 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-212ENST00000479586 LKAAEAR1Q8TD35 194 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 ZNF354BQ96LW1 612 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 NPAS2Q99743 824 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 ZFYVE21Q9BQ24 234 aa16.4■□□□□ 0.22
HMGN1-212ENST00000479586 UTP23Q9BRU9 249 aaKnown RBP16.4■□□□□ 0.22
HMGN1-212ENST00000479586 RUVBL1Q9Y265 456 aaKnown RBP16.4■□□□□ 0.22
HMGN1-212ENST00000479586 RPH3AQ9Y2J0 694 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-212ENST00000479586 JMJD1CQ15652 2540 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 SMTNL1A8MU46 457 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 PRPF4O43172 522 aaKnown RBP eCLIP16.39■□□□□ 0.21
HMGN1-212ENST00000479586 SPOPO43791 374 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 GYPCP04921 128 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 CD46P15529 392 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
HMGN1-212ENST00000479586 MSX1P28360 303 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 FOXN2P32314 431 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 MAT1AQ00266 395 aaKnown RBP16.39■□□□□ 0.21
HMGN1-212ENST00000479586 FOLH1Q04609 750 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 POU6F1Q14863 301 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 CEBPEQ15744 281 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 PLAG1Q6DJT9 500 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 H3F3CQ6NXT2 135 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 FBXO42Q6P3S6 717 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 UNC5DQ6UXZ4 953 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 CRLF3Q8IUI8 442 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 EID3Q8N140 333 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 TMEM178AQ8NBL3 297 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 MVB12AQ96EY5 273 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 KCNN3Q9UGI6 736 aa16.39■□□□□ 0.21
HMGN1-212ENST00000479586 FEZ2Q9UHY8 353 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-212ENST00000479586 HRNRQ86YZ3 2850 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-212ENST00000479586 OR2A25A4D2G3 310 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 FOXS1O43638 330 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 GPC4O75487 556 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 TOXO94900 526 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 ANXA5P08758 320 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 PTGER1P34995 402 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 SLC1A1P43005 524 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 EMP3P54852 163 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 MYBPHQ13203 477 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-212ENST00000479586 HKDC1Q2TB90 917 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 CCSMST1Q4G0I0 132 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 CES4AQ5XG92 561 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 CSNK1A1LQ8N752 337 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 FAM98AQ8NCA5 519 aaKnown RBP16.38■□□□□ 0.21
HMGN1-212ENST00000479586 OR2A1Q8NGT9 310 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 STYXQ8WUJ0 223 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 NINJ1Q92982 152 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 RAB11FIP5Q9BXF6 653 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 HEMGNQ9BXL5 484 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 VN1R1Q9GZP7 353 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 LIME1Q9H400 295 aa16.38■□□□□ 0.21
HMGN1-212ENST00000479586 KCNK13Q9HB14 408 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms