RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 ST8SIA6P61647 398 aa26.69■■□□□ 1.86
CHKB-208ENST00000479003 HSPA14Q0VDF9 509 aa26.69■■□□□ 1.86
CHKB-208ENST00000479003 CMTM7Q96FZ5 175 aa26.69■■□□□ 1.86
CHKB-208ENST00000479003 TUBA1CQ9BQE3 449 aa26.69■■□□□ 1.86
CHKB-208ENST00000479003 TRMT61BQ9BVS5 477 aaKnown RBP26.69■■□□□ 1.86
CHKB-208ENST00000479003 MBD1Q9UIS9 605 aaPredicted RBP26.69■■□□□ 1.86
CHKB-208ENST00000479003 HIST1H2AGP0C0S8 130 aaPredicted RBP26.68■■□□□ 1.86
CHKB-208ENST00000479003 HLA-EP13747 358 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 PCSK2P16519 638 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 IL1RNP18510 177 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 POU3F3P20264 500 aaPredicted RBP26.68■■□□□ 1.86
CHKB-208ENST00000479003 HIST1H2ADP20671 130 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 ELK4P28324 431 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 PPP2R2BQ00005 443 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 EPS8Q12929 822 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 MYBPC3Q14896 1274 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 ARSIQ5FYB1 569 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 ZNF773Q6PK81 442 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 BEND7Q8N7W2 519 aaPredicted RBP26.68■■□□□ 1.86
CHKB-208ENST00000479003 PJA1Q8NG27 643 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 ITCHQ96J02 903 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 HIST1H2AHQ96KK5 128 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 HIST1H2AJQ99878 128 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 H2AFJQ9BTM1 129 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 TOR3AQ9H497 397 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 RMND5AQ9H871 391 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 BRD9Q9H8M2 597 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 UTS2RQ9UKP6 389 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 COLQQ9Y215 455 aaPredicted RBP26.68■■□□□ 1.86
CHKB-208ENST00000479003 SLC16A5O15375 505 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 CPNE6O95741 557 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 SP140Q13342 867 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 TTC23Q5W5X9 447 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 NEK5Q6P3R8 708 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 TMEM132CQ8N3T6 1108 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 POP5Q969H6 163 aaKnown RBP26.68■■□□□ 1.86
CHKB-208ENST00000479003 TESCQ96BS2 214 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 FAM120BQ96EK7 910 aaKnown RBP26.68■■□□□ 1.86
CHKB-208ENST00000479003 ZDHHC4Q9NPG8 344 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 B4GALT6Q9UBX8 382 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 TMED5Q9Y3A6 229 aa26.68■■□□□ 1.86
CHKB-208ENST00000479003 HEMK1Q9Y5R4 338 aaPredicted RBP26.68■■□□□ 1.86
CHKB-208ENST00000479003 TCF20Q9UGU0 1960 aaKnown RBP26.67■■□□□ 1.86
CHKB-208ENST00000479003 SERTM1A2A2V5 107 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 TBC1D3BA6NDS4 549 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 C16orf96A6NNT2 1141 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 MAPK1P28482 360 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 NEK2P51955 445 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 IST1P53990 364 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 EMP3P54852 163 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 EIF4HQ15056 248 aaKnown RBP26.67■■□□□ 1.86
CHKB-208ENST00000479003 PTCHD3Q3KNS1 767 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 FNDC3BQ53EP0 1204 aaKnown RBP26.67■■□□□ 1.86
CHKB-208ENST00000479003 PLEKHS1Q5SXH7 462 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 THAP5Q7Z6K1 395 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 VRK3Q8IV63 474 aa26.67■■□□□ 1.86
CHKB-208ENST00000479003 CNDP2Q96KP4 475 aaKnown RBP26.67■■□□□ 1.86
CHKB-208ENST00000479003 GFYI3L273 518 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 ATP1B2P14415 290 aaPredicted RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 HOXB6P17509 224 aaKnown RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 SDC1P18827 310 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 PTPN6P29350 595 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 SOX9P48436 509 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 HNRNPFP52597 415 aaKnown RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 SUSD6Q92537 303 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 GFM2Q969S9 779 aaKnown RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 NCLNQ969V3 563 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 HHIPQ96QV1 700 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 ING2Q9H160 280 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 SMURF2Q9HAU4 748 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 FAM118AQ9NWS6 357 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 IL36AQ9UHA7 158 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 PPT2Q9UMR5 302 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 TMEM265A0A087WTH1 108 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 ACPPP15309 386 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 JUNBP17275 347 aaPredicted RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 RGS19P49795 217 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 ZNF234Q14588 700 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 POM121L1PQ3SYA9 428 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 SLC44A4Q53GD3 710 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 DET1Q7L5Y6 550 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 CHST15Q7LFX5 561 aaPredicted RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 C8orf59Q8N0T1 100 aaPredicted RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 C10orf111Q8N326 155 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 MIPOL1Q8TD10 442 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 SKA2Q8WVK7 121 aaPredicted RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 TSSK3Q96PN8 268 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 MBOAT4Q96T53 435 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 RBM4BQ9BQ04 359 aaKnown RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 INPP5KQ9BT40 448 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 RBM4Q9BWF3 364 aaKnown RBP26.66■■□□□ 1.86
CHKB-208ENST00000479003 GMEB1Q9Y692 573 aa26.66■■□□□ 1.86
CHKB-208ENST00000479003 GNGT2O14610 69 aa26.65■■□□□ 1.86
CHKB-208ENST00000479003 WNT9AO14904 365 aa26.65■■□□□ 1.86
CHKB-208ENST00000479003 TACR1P25103 407 aa26.65■■□□□ 1.86
CHKB-208ENST00000479003 LAPTM5Q13571 262 aa26.65■■□□□ 1.86
CHKB-208ENST00000479003 RBM48Q5RL73 367 aaKnown RBP26.65■■□□□ 1.86
CHKB-208ENST00000479003 GPR107Q5VW38 600 aa26.65■■□□□ 1.86
CHKB-208ENST00000479003 ADHFE1Q8IWW8 467 aa26.65■■□□□ 1.86
CHKB-208ENST00000479003 NETO1Q8TDF5 533 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms