RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TRIM49D1C9J1S8 452 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 H7BY64 318 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 HAT1O14929 419 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 ZNF749O43361 778 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 CPNE3O75131 537 aaKnown RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 OR2B3O76000 313 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 KRT38O76015 456 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 FKBP9O95302 570 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 SHBGP04278 402 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 ANXA5P08758 320 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 LTA4HP09960 611 aaKnown RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 MSL3P1P0C860 447 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 GLRBP48167 497 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 CSRP3P50461 194 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 ATP1A2P50993 1020 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 NAA30Q147X3 362 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 TGFBIQ15582 683 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 FRMPD2BQ6IN97 320 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 CAPN13Q6MZZ7 669 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 C6orf15Q6UXA7 325 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 BPHLQ86WA6 291 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 PAQR7Q86WK9 346 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 GPSM1Q86YR5 675 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 MCATQ8IVS2 390 aaKnown RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 GPR135Q8IZ08 494 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 CENPLQ8N0S6 344 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 ZNF655Q8N720 491 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-222ENST00000478095 SLC38A9Q8NBW4 561 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 OR8K5Q8NH50 307 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 OR56A3Q8NH54 315 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 ATL1Q8WXF7 558 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 KIAA1191Q96A73 305 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 ZUFSPQ96AP4 578 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 CLIP3Q96DZ5 547 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 TSNARE1Q96NA8 513 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 PRAP1Q96NZ9 151 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 SELENOSQ9BQE4 189 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 PLCD4Q9BRC7 762 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 DHRS4Q9BTZ2 278 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 SGPP1Q9BX95 441 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 DPH1Q9BZG8 443 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 SLC7A5P2Q9GIP4 190 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 CHRNA10Q9GZZ6 450 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 SYNPO2LQ9H987 977 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 CPNE5Q9HCH3 593 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 ZNF180Q9UJW8 692 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 SERTAD3Q9UJW9 196 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 RNF112Q9ULX5 631 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 PLCL2Q9UPR0 1127 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 DMXL2Q8TDJ6 3036 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 LOC105369274A0A096LPK9 316 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 LOC102723532A0A0G2JNH3 316 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 LOC101059948A0A1B0GTJ6 334 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 SMIM23A6NLE4 172 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 SUPT3HB4E1H0 165 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 TARM1B6A8C7 271 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 H3BMH7 237 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 UBXN8O00124 270 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ZSCAN9O15535 394 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 SUPT3HO75486 399 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 KRT37O76014 449 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 STATHP02808 62 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 EIF2S1P05198 315 aaKnown RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 CDH1P12830 882 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 NPPBP16860 134 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 WT1P19544 449 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 CCND1P24385 295 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 HSD17B3P37058 310 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 GDF5P43026 501 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 SLCO1A2P46721 670 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 KCNC1P48547 511 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 VSX2P58304 361 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ABATP80404 500 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 CDKL1Q00532 357 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 GPS2Q13227 327 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 COL28A1Q2UY09 1125 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 PTCHD3Q3KNS1 767 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ZC3H12BQ5HYM0 836 aaKnown RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 MANEAQ5SRI9 462 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 C1orf189Q5VU69 101 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 BROXQ5VW32 411 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 WDR93Q6P2C0 686 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 FAM199XQ6PEV8 388 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 RNF44Q7L0R7 432 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ISCA2Q86U28 154 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 OR4N4Q8N0Y3 316 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 PLD6Q8N2A8 252 aaKnown RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ESX1Q8N693 406 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 AENQ8WTP8 325 aaKnown RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ESAMQ96AP7 390 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 RHBDF1Q96CC6 855 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 OR4K3Q96R72 315 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 RUFY1Q96T51 708 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ZFYVE21Q9BQ24 234 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 TMEM79Q9BSE2 394 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 PARD6BQ9BYG5 372 aa9.84□□□□□ -0.83
HDAC6-222ENST00000478095 ACTR5Q9H9F9 607 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-222ENST00000478095 AKIRIN1Q9H9L7 192 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms