RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 O00370 1275 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 SRPX2O60687 465 aaPredicted RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 CA11O75493 328 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 ACTL6AO96019 429 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 KRT18P05783 430 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 IFIT2P09913 472 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 HSPA8P11142 646 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 GP1BBP13224 206 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 SELEP16581 610 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 CYLC2Q14093 348 aaPredicted RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 EIF4A2Q14240 407 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 MELKQ14680 651 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 KIAA0040Q15053 153 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 TMEM44Q2T9K0 475 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 PCGF3Q3KNV8 242 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 RARS2Q5T160 578 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 INTS11Q5TA45 600 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 RPAP2Q8IXW5 612 aaPredicted RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 PAPD5Q8NDF8 572 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 SETD7Q8WTS6 366 aaKnown RBP0.56□□□□□ -2.32
CALD1-218ENST00000478075 SMARCE1Q969G3 411 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 C11orf52Q96A22 123 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 ERLEC1Q96DZ1 483 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 UBXN10Q96LJ8 280 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 C4orf45Q96LM5 186 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 TAAR6Q96RI8 345 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 RANBP9Q96S59 729 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 SCPEP1Q9HB40 452 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 SMC4Q9NTJ3 1288 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 RHCGQ9UBD6 479 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 ASTN1O14525 1302 aa0.56□□□□□ -2.32
CALD1-218ENST00000478075 A0A1W2PQF6 199 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 TRIM49D1C9J1S8 452 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 K7EQG2 157 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 SCO2O43819 266 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 SSX4O60224 188 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 MTRF1O75570 445 aaKnown RBP0.55□□□□□ -2.32
CALD1-218ENST00000478075 SEC14L2O76054 403 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 AXLP30530 894 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 RARSP54136 660 aaKnown RBP0.55□□□□□ -2.32
CALD1-218ENST00000478075 STX17P56962 302 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 OLR1P78380 273 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 PPP2R2BQ00005 443 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 SRSF9Q13242 221 aaKnown RBP eCLIP0.55□□□□□ -2.32
CALD1-218ENST00000478075 BAK1Q16611 211 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 ACSM2BQ68CK6 577 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 ZNF544Q6NX49 715 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 R3HCC1LQ7Z5L2 792 aaKnown RBP0.55□□□□□ -2.32
CALD1-218ENST00000478075 ZNF589Q86UQ0 364 aaPredicted RBP0.55□□□□□ -2.32
CALD1-218ENST00000478075 CARM1Q86X55 608 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 GPC2Q8N158 579 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 NFKBIDQ8NI38 313 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 MORC4Q8TE76 937 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 MOAP1Q96BY2 351 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 DHX58Q96C10 678 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 NTNG2Q96CW9 530 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 IMMP1LQ96LU5 166 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 OR6C1Q96RD1 312 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 C16orf70Q9BSU1 422 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 RSPO3Q9BXY4 272 aaPredicted RBP0.55□□□□□ -2.32
CALD1-218ENST00000478075 PCGF6Q9BYE7 350 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 GPR63Q9BZJ6 419 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 STRADBQ9C0K7 418 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 MOB1AQ9H8S9 216 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 B3GAT1Q9P2W7 334 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 RSPH14Q9UHP6 348 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 ZHX1Q9UKY1 873 aaPredicted RBP0.55□□□□□ -2.32
CALD1-218ENST00000478075 GRIP1Q9Y3R0 1128 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 NME7Q9Y5B8 376 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 CFAP65Q6ZU64 1925 aaKnown RBP0.55□□□□□ -2.32
CALD1-218ENST00000478075 KDM3AQ9Y4C1 1321 aa0.55□□□□□ -2.32
CALD1-218ENST00000478075 ARHGAP23Q9P227 1491 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 hCG_1642624A0A1W2PR95 340 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 RNF103O00237 685 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 FPGTO14772 594 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 SEMA4FO95754 770 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 ADORA3P0DMS8 318 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 MNDAP41218 407 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 DNA2P51530 1060 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 TRIM29Q14134 588 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 GSG1Q2KHT4 349 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 SLC22A6Q4U2R8 563 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 C1orf228Q6PIY5 440 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 ZNF600Q6ZNG1 722 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 FCRLAQ7L513 359 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 SPICE1Q8N0Z3 855 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 ARHGAP24Q8N264 748 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 OR7A2PQ8NGA2 310 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 OR5M8Q8NGP6 311 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 SVIPQ8NHG7 77 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 INTS12Q96CB8 462 aaKnown RBP0.54□□□□□ -2.32
CALD1-218ENST00000478075 PLCB1Q9NQ66 1216 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.54□□□□□ -2.32
CALD1-218ENST00000478075 GEMIN8Q9NWZ8 242 aaKnown RBP0.54□□□□□ -2.32
CALD1-218ENST00000478075 DHRS4-AS1Q9P1J3 65 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 ELF5Q9UKW6 265 aaPredicted RBP0.54□□□□□ -2.32
CALD1-218ENST00000478075 TBX20Q9UMR3 447 aa0.54□□□□□ -2.32
CALD1-218ENST00000478075 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 TRGV8A0A0C4DH27 118 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 SLC1A7O00341 560 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms