RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 KAT8Q9H7Z6 458 aaKnown RBP18.13■□□□□ 0.49
VARS2-209ENST00000477288 MED11Q9P086 117 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 KANTRA0A1W2PQU2 76 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 SMCO3A2RU48 225 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 SCDO00767 359 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 GABRDO14764 452 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 AXIN1O15169 862 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 BDKRB1P46663 353 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 SPATC1Q76KD6 591 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 YIPF7Q8N8F6 280 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 ZNF471Q9BX82 626 aaPredicted RBP18.13■□□□□ 0.49
VARS2-209ENST00000477288 CXorf21Q9HAI6 301 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 CRTAC1Q9NQ79 661 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 MLXQ9UH92 298 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 TAC3Q9UHF0 121 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 PPEF2O14830 753 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 FCER2P06734 321 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.13■□□□□ 0.49
VARS2-209ENST00000477288 Q6ZVU0 165 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 PCDH19Q8TAB3 1148 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 ACDQ96AP0 544 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 PPP1R14BQ96C90 147 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 SLC35A5Q9BS91 424 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 PCDHGA10Q9Y5H3 936 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 SHPRHQ149N8 1683 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 ZNF99A8MXY4 864 aaPredicted RBP18.13■□□□□ 0.49
VARS2-209ENST00000477288 NPIPA5E9PKD4 350 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 RPL10P27635 214 aaKnown RBP18.13■□□□□ 0.49
VARS2-209ENST00000477288 BEND4Q6ZU67 534 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 CMTR2Q8IYT2 770 aaKnown RBP18.13■□□□□ 0.49
VARS2-209ENST00000477288 INO80EQ8NBZ0 244 aaPredicted RBP18.13■□□□□ 0.49
VARS2-209ENST00000477288 GATA5Q9BWX5 397 aaPredicted RBP18.13■□□□□ 0.49
VARS2-209ENST00000477288 NPIPA1Q9UND3 350 aa18.13■□□□□ 0.49
VARS2-209ENST00000477288 EDDM13A0A1B0GTR0 161 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 INPPL1O15357 1258 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 IRAK2O43187 625 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 NUAK1O60285 661 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 TAS2R39P59534 338 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 DEFA5Q01523 94 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 OCLNQ16625 522 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 ODF4Q2M2E3 257 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 RAB11FIP2Q7L804 512 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 LRRC70Q7Z2Q7 622 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 ACOT12Q8WYK0 555 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 NCSTNQ92542 709 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 EFCAB9A8MZ26 197 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 NIPSNAP2O75323 286 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 MTHFD1P11586 935 aaKnown RBP18.12■□□□□ 0.49
VARS2-209ENST00000477288 S100A2P29034 98 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 IRF9Q00978 393 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 ALG10Q5BKT4 473 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 ADGRF1Q5T601 910 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 GKN2Q86XP6 184 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 OR10G2Q8NGC3 310 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 OR5K1Q8NHB7 308 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
VARS2-209ENST00000477288 COL21A1Q96P44 957 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 UCK2Q9BZX2 261 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 COQ10BQ9H8M1 238 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 DTLQ9NZJ0 730 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 RPL36Q9Y3U8 105 aaKnown RBP18.12■□□□□ 0.49
VARS2-209ENST00000477288 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 MMP20O60882 483 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 KLK1P06870 262 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 PRDX6P30041 224 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 APLP1P51693 650 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 MPP2Q14168 576 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 GRM2Q14416 872 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 METTL21CQ5VZV1 264 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 CLEC20AQ6ZU45 233 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 SLC30A8Q8IWU4 369 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 SLC22A8Q8TCC7 542 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 WNT6Q9Y6F9 365 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 MUSKO15146 869 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 ATF4P18848 351 aaPredicted RBP18.12■□□□□ 0.49
VARS2-209ENST00000477288 VIPR1P32241 457 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 CCINQ13939 588 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 SOWAHAQ2M3V2 549 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 RBM48Q5RL73 367 aaKnown RBP18.12■□□□□ 0.49
VARS2-209ENST00000477288 ZNF776Q68DI1 518 aaPredicted RBP18.12■□□□□ 0.49
VARS2-209ENST00000477288 GLB1L3Q8NCI6 653 aaPredicted RBP18.12■□□□□ 0.49
VARS2-209ENST00000477288 OR4E2Q8NGC2 313 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 METTL7AQ9H8H3 244 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 NEMP2A6NFY4 417 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 GPR89AB7ZAQ6 455 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 HLA-DQB2P05538 268 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 GPR89BP0CG08 455 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 HOXB2P14652 356 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 GDF10P55107 478 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 CHRNA6Q15825 494 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 HGSNATQ68CP4 663 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 OR2L2Q8NH16 312 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 TMEM5Q9Y2B1 443 aa18.12■□□□□ 0.49
VARS2-209ENST00000477288 B4GALT2O60909 372 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 ITGA5P08648 1049 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 HK1P19367 917 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 JAM2P57087 298 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 JAGN1Q8N5M9 183 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 IGSF9Q9P2J2 1179 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 PPM1HQ9ULR3 514 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms