RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CAPNS1P04632 268 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 UROSP10746 265 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 COL6A2P12110 1019 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CDKN2CP42773 168 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RPS14P62263 151 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 UGT8Q16880 541 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ODF4Q2M2E3 257 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TRIM71Q2Q1W2 868 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 LEXMQ3ZCV2 418 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CCDC92Q53HC0 331 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SPANXN2Q5MJ10 180 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CCNYL2Q5T2Q4 361 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 LRRC66Q68CR7 880 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CXorf57Q6NSI4 855 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RETSATQ6NUM9 610 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 GET4Q7L5D6 327 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 KRT74Q7RTS7 529 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 IQCF1Q8N6M8 205 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TERB1Q8NA31 727 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 DRAXINQ8NBI3 349 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 C1GALT1C1Q96EU7 318 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 APIPQ96GX9 242 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 C1QTNF1Q9BXJ1 281 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 LRRC3Q9BY71 257 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 HDHD2Q9H0R4 259 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RMND5AQ9H871 391 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 HMG20AQ9NP66 347 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RAD18Q9NS91 495 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 GPR83Q9NYM4 423 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TMCO1Q9UM00 188 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TBC1D30Q9Y2I9 924 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM98Q9Y2Y6 226 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 YARS2Q9Y2Z4 477 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 EFCAB9A8MZ26 197 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 WASH3PC4AMC7 463 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 M0QX08 132 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 WWP2O00308 870 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CNOT3O75175 753 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TIMP1P01033 207 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 URODP06132 367 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ASGR2P07307 311 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 STSP08842 583 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FCGR1AP12314 374 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 DGKAP23743 735 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CDC42EP1Q00587 391 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 DGUOKQ16854 277 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RPS26P11Q5JNZ5 115 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TTC23Q5W5X9 447 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ASB18Q6ZVZ8 466 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 GRASPQ7Z6J2 395 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CYP4Z1Q86W10 505 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 PARGQ86W56 976 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FAM129CQ86XR2 697 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ZBTB2Q8N680 514 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 VPS37AQ8NEZ2 397 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 PIH1D2Q8WWB5 315 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 LZICQ8WZA0 190 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CENPIQ92674 756 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 VWCEQ96DN2 955 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FOPNLQ96NB1 174 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SLC2A13Q96QE2 648 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 HOPXQ9BPY8 73 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TTPALQ9BTX7 342 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RNF38Q9H0F5 515 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ANKRA2Q9H9E1 313 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 GDAP2Q9NXN4 497 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TVP23BQ9NYZ1 205 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RCOR3Q9P2K3 495 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SUCOQ9UBS9 1254 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ABCG2Q9UNQ0 655 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 GPR52Q9Y2T5 361 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 MYOFQ9NZM1 2061 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SCN3AQ9NY46 2000 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 WASHC1A8K0Z3 465 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CLIC1O00299 241 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ACOT8O14734 319 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CREG1O75629 220 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PDYNP01213 254 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 GPX3P22352 226 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ETV3P41162 512 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 VIPR2P41587 438 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 MAGEA3P43357 314 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CDK9P50750 372 aaKnown RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ERVK-8P63133 956 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 C2orf80Q0P641 193 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CAMK2GQ13555 558 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ANGPT1Q15389 498 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF284Q2VY69 593 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ZBED5Q49AG3 693 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 BRMS1LQ5PSV4 323 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 WASH2PQ6VEQ5 465 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PRR23CQ6ZRP0 262 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PTCHD4Q6ZW05 846 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 HID1Q8IV36 788 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ERI1Q8IV48 349 aaKnown RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ADGRG5Q8IZF4 528 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PGBD3Q8N328 593 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 WFDC5Q8TCV5 224 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 BORCS5Q969J3 196 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 NTAN1Q96AB6 310 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms