RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CYP4X1Q8N118 509 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 ZCCHC14Q8WYQ9 949 aaKnown RBP28.38■■■□□ 2.13
HOXB3-208ENST00000476342 PTBP2Q9UKA9 531 aaKnown RBP28.38■■■□□ 2.13
HOXB3-208ENST00000476342 SLC22A14Q9Y267 594 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 DYRK1BQ9Y463 629 aa28.38■■■□□ 2.13
HOXB3-208ENST00000476342 IGKV1-8A0A0C4DH67 115 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 GOLGA8RI6L899 631 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 CTIFO43310 598 aaKnown RBP28.37■■■□□ 2.13
HOXB3-208ENST00000476342 WDR47O94967 919 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 CAPNS1P04632 268 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 PYGBP11216 843 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 GABRA4P48169 554 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 ZNF425Q6IV72 752 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 GPR135Q8IZ08 494 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 OR4K3Q96R72 315 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 MRPL57Q9BQC6 102 aaKnown RBP28.37■■■□□ 2.13
HOXB3-208ENST00000476342 TMEM79Q9BSE2 394 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 TMEM109Q9BVC6 243 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 TMEM184CQ9NVA4 438 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 CUEDC1Q9NWM3 386 aaPredicted RBP28.37■■■□□ 2.13
HOXB3-208ENST00000476342 XPR1Q9UBH6 696 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 KCNE2Q9Y6J6 123 aa28.37■■■□□ 2.13
HOXB3-208ENST00000476342 A0A1W2PPM1 405 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 GSTA1P08263 222 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 GFAPP14136 432 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 ITGA1P56199 1179 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 PAQR7Q86WK9 346 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 SNIP1Q8TAD8 396 aaKnown RBP28.36■■■□□ 2.13
HOXB3-208ENST00000476342 ZFYVE21Q9BQ24 234 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 ULBP3Q9BZM4 244 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 MRPL46Q9H2W6 279 aaKnown RBP28.36■■■□□ 2.13
HOXB3-208ENST00000476342 LGALS13Q9UHV8 139 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 IGF2RP11717 2491 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 ACACAQ13085 2346 aa28.36■■■□□ 2.13
HOXB3-208ENST00000476342 SDK2Q58EX2 2172 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 STMND1H3BQB6 276 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 H7BY64 318 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 TAPBPO15533 448 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 STK16O75716 305 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 MTHFD2P13995 350 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 EZRP15311 586 aaKnown RBP28.35■■■□□ 2.13
HOXB3-208ENST00000476342 HSPA7P48741 367 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 C18orf21Q32NC0 220 aaPredicted RBP28.35■■■□□ 2.13
HOXB3-208ENST00000476342 RNF44Q7L0R7 432 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 TMEM126BQ8IUX1 230 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 OR1L3Q8NH93 324 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 HNRNPLLQ8WVV9 542 aaKnown RBP28.35■■■□□ 2.13
HOXB3-208ENST00000476342 PRAP1Q96NZ9 151 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 IRAK4Q9NWZ3 460 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 TMCO1Q9UM00 188 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 APC2O95996 2303 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 E7EQ34 232 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 MAP2K7O14733 419 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 CTSVO60911 334 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 CDH1P12830 882 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 GDF5P43026 501 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 RELAQ04206 551 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 PWWP2BQ6NUJ5 590 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 MCATQ8IVS2 390 aaKnown RBP28.35■■■□□ 2.13
HOXB3-208ENST00000476342 ZNF248Q8NDW4 579 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 UBTD2Q8WUN7 234 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 SLC5A11Q8WWX8 675 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 SELENOSQ9BQE4 189 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 CPSF2Q9P2I0 782 aaKnown RBP28.35■■■□□ 2.13
HOXB3-208ENST00000476342 DCDC2Q9UHG0 476 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 SH2B3Q9UQQ2 575 aa28.35■■■□□ 2.13
HOXB3-208ENST00000476342 AHCTF1Q8WYP5 2266 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 A0A0J9YVX5 310 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 IQCJ-SCHIP1C9J366 451 aaPredicted RBP28.34■■■□□ 2.13
HOXB3-208ENST00000476342 HCRTR1O43613 425 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 TLX3O43711 291 aaPredicted RBP28.34■■■□□ 2.13
HOXB3-208ENST00000476342 SCRG1O75711 98 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 OR2B3O76000 313 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 STK17BO94768 372 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 GRK3P35626 688 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 ALDH18A1P54886 795 aaKnown RBP28.34■■■□□ 2.13
HOXB3-208ENST00000476342 BEND6Q5SZJ8 279 aaPredicted RBP28.34■■■□□ 2.13
HOXB3-208ENST00000476342 LRRC70Q7Z2Q7 622 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 MYRIPQ8NFW9 859 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 NEIL2Q969S2 332 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 CAPS2Q9BXY5 557 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 CD244Q9BZW8 370 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 DNAJC11Q9NVH1 559 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 PILRAQ9UKJ1 303 aa28.34■■■□□ 2.13
HOXB3-208ENST00000476342 TMEM184BQ9Y519 407 aaPredicted RBP28.34■■■□□ 2.13
HOXB3-208ENST00000476342 SPTBP11277 2137 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 ACACBO00763 2458 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 TK2O00142 265 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 KLK8O60259 260 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 NRP2O60462 931 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 SRPX2O60687 465 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-208ENST00000476342 SMIM24O75264 130 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 GLRA3O75311 464 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 KIAA0754O94854 1291 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 LIPCP11150 499 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 CCR8P51685 355 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 CDC16Q13042 620 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 PFKFB4Q16877 469 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 KRT71Q3SY84 523 aa28.33■■■□□ 2.13
HOXB3-208ENST00000476342 FBXO48Q5FWF7 155 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms