RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 ICAM2P13598 275 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 CMPK1P30085 196 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 SLC26A3P40879 764 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 KCNK10P57789 538 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 GBX1Q14549 363 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 PCID2Q5JVF3 399 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 RPTNQ6XPR3 784 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 BNC2Q6ZN30 1099 aaPredicted RBP16.96■□□□□ 0.31
PCGF3-209ENST00000475288 LAPTM4BQ86VI4 370 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 ZNF808Q8N4W9 903 aaPredicted RBP16.96■□□□□ 0.31
PCGF3-209ENST00000475288 TAB3Q8N5C8 712 aaPredicted RBP16.96■□□□□ 0.31
PCGF3-209ENST00000475288 MAGEB10Q96LZ2 347 aaPredicted RBP16.96■□□□□ 0.31
PCGF3-209ENST00000475288 TRIM5Q9C035 493 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 ZNF700Q9H0M5 742 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 CHST11Q9NPF2 352 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 MKKSQ9NPJ1 570 aaPredicted RBP16.96■□□□□ 0.31
PCGF3-209ENST00000475288 MARCH4Q9P2E8 410 aaPredicted RBP16.96■□□□□ 0.31
PCGF3-209ENST00000475288 ADGRG4Q8IZF6 3080 aa16.96■□□□□ 0.31
PCGF3-209ENST00000475288 CELSR1Q9NYQ6 3014 aa16.96■□□□□ 0.3
PCGF3-209ENST00000475288 H0YGG7 62 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 LIASO43766 372 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 NRP2O60462 931 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 VPS26AO75436 327 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 EIF2S1P05198 315 aaKnown RBP16.95■□□□□ 0.3
PCGF3-209ENST00000475288 CYC1P08574 325 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 CA7P43166 264 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 BDKRB1P46663 353 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 ARF3P61204 181 aaPredicted RBP16.95■□□□□ 0.3
PCGF3-209ENST00000475288 ARHGAP19Q14CB8 494 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 CCSMST1Q4G0I0 132 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 TMEM205Q6UW68 189 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 TMEM207Q6UWW9 146 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 GDF7Q7Z4P5 450 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 LDB1Q86U70 411 aaPredicted RBP16.95■□□□□ 0.3
PCGF3-209ENST00000475288 PRSS58Q8IYP2 241 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 HES6Q96HZ4 224 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 CABS1Q96KC9 395 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 PLCD4Q9BRC7 762 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 DPH7Q9BTV6 452 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 TREX1Q9NSU2 369 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 PLA2G3Q9NZ20 509 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 TRPC4Q9UBN4 977 aa16.95■□□□□ 0.3
PCGF3-209ENST00000475288 TACC2O95359 2948 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 TXNDC9O14530 226 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 WFS1O76024 890 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 ADARP55265 1226 aaKnown RBP16.94■□□□□ 0.3
PCGF3-209ENST00000475288 ZNF630Q2M218 657 aaPredicted RBP16.94■□□□□ 0.3
PCGF3-209ENST00000475288 PAQR7Q86WK9 346 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 ARHGEF39Q8N4T4 335 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 SIRT6Q8N6T7 355 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 AMER3Q8N944 861 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 SKA2Q8WVK7 121 aaPredicted RBP16.94■□□□□ 0.3
PCGF3-209ENST00000475288 ATG4AQ8WYN0 398 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 CCDC120Q96HB5 630 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 RAB6BQ9NRW1 208 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 IGSF5Q9NSI5 407 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 UTP6Q9NYH9 597 aaKnown RBP16.94■□□□□ 0.3
PCGF3-209ENST00000475288 PACSIN2Q9UNF0 486 aaPredicted RBP16.94■□□□□ 0.3
PCGF3-209ENST00000475288 RUVBL1Q9Y265 456 aaKnown RBP16.94■□□□□ 0.3
PCGF3-209ENST00000475288 PCDHGB6Q9Y5F9 930 aa16.94■□□□□ 0.3
PCGF3-209ENST00000475288 AP3B1O00203 1094 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 NDUFS3O75489 264 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 RASAL1O95294 804 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 WDPCPO95876 746 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 HEXBP07686 556 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 PKMP14618 531 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 EZRP15311 586 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 GRNP28799 593 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 HSD17B2P37059 387 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 RIPPLY3P57055 190 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 EEF1A2Q05639 463 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 FAM53BQ14153 422 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 FASTKQ14296 549 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 ZXDCQ2QGD7 858 aaPredicted RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 ZNF425Q6IV72 752 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 HIBCHQ6NVY1 386 aaPredicted RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 RAD9BQ6WBX8 426 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 MRGPRGQ86SM5 289 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 CSNK1A1LQ8N752 337 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 OR9A1PQ8NGU1 263 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 SUN3Q8TAQ9 357 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 SMPDL3AQ92484 453 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 IMMP1LQ96LU5 166 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 TUBB6Q9BUF5 446 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 IL22Q9GZX6 179 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.93■□□□□ 0.36e-7■■■■□ 22.9
PCGF3-209ENST00000475288 MRPS30Q9NP92 439 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 EIF2B3Q9NR50 452 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 CHRAC1Q9NRG0 131 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 PAK5Q9P286 719 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 SEC14L3Q9UDX4 400 aa16.93■□□□□ 0.3
PCGF3-209ENST00000475288 RUVBL2Q9Y230 463 aaKnown RBP16.93■□□□□ 0.3
PCGF3-209ENST00000475288 IGKV1-8A0A0C4DH67 115 aa16.92■□□□□ 0.3
PCGF3-209ENST00000475288 KRT87PA6NCN2 255 aa16.92■□□□□ 0.3
PCGF3-209ENST00000475288 OR5H15A6NDH6 313 aa16.92■□□□□ 0.3
PCGF3-209ENST00000475288 H3BMM5 538 aa16.92■□□□□ 0.3
PCGF3-209ENST00000475288 MYO1CO00159 1063 aa16.92■□□□□ 0.3
PCGF3-209ENST00000475288 PRAMEF2O60811 474 aa16.92■□□□□ 0.3
PCGF3-209ENST00000475288 UNC5CO95185 931 aa16.92■□□□□ 0.3
PCGF3-209ENST00000475288 IFNB1P01574 187 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms