RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SLCO2B1O94956 709 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 PTMAP06454 111 aaKnown RBP11.97□□□□□ -0.49
SKA3-206ENST00000475251 CYC1P08574 325 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 ITGAMP11215 1152 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 CMPK1P30085 196 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 CTNNA1P35221 906 aaKnown RBP11.97□□□□□ -0.49
SKA3-206ENST00000475251 CDH17Q12864 832 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 C3AR1Q16581 482 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 FASTKD1Q53R41 847 aaKnown RBP11.97□□□□□ -0.49
SKA3-206ENST00000475251 ZNF766Q5HY98 468 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 GARNL3Q5VVW2 1013 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 LAPTM4BQ86VI4 370 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 VRK3Q8IV63 474 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 DNAAF3Q8N9W5 541 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 OR4L1Q8NH43 312 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 SKA2Q8WVK7 121 aaPredicted RBP11.97□□□□□ -0.49
SKA3-206ENST00000475251 METTL21AQ8WXB1 218 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 C10orf90Q96M02 699 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 MIPEPQ99797 713 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 SPATA7Q9P0W8 599 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 TINAGQ9UJW2 476 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 RIMKLBQ9ULI2 386 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 PCDHA3Q9Y5H8 950 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 PKDREJQ9NTG1 2253 aa11.97□□□□□ -0.49
SKA3-206ENST00000475251 AKAP9Q99996 3911 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 LOC105369274A0A096LPK9 316 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 LOC102723532A0A0G2JNH3 316 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 OR2A25A4D2G3 310 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 ERI2A8K979 691 aaKnown RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 MED26O95402 600 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 GOT2P00505 430 aaKnown RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 C8orf89P0DMQ9 161 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 CD1EP15812 388 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 AOAHP28039 575 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 SLC26A3P40879 764 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 RWDD2BP57060 319 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 PRAMEP78395 509 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 TLE4Q04727 773 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 PCOLCEQ15113 449 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 PRTGQ2VWP7 1150 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 TMEM205Q6UW68 189 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 Q6ZPB1 254 aaPredicted RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 MICALCLQ6ZW33 695 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 NEK10Q6ZWH5 1172 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 SPPL2CQ8IUH8 684 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 OR4N4Q8N0Y3 316 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 FAM98AQ8NCA5 519 aaKnown RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 OR13J1Q8NGT2 312 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 OR2A1Q8NGT9 310 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 OR6P1Q8NGX9 317 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 PEX13Q92968 403 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 HDAC10Q969S8 669 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 RERGQ96A58 199 aaPredicted RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 MMABQ96EY8 250 aaPredicted RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 ZNF354BQ96LW1 612 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 GPR137Q96N19 417 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 FAM118BQ9BPY3 351 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 MCCC2Q9HCC0 563 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 C19orf25Q9UFG5 118 aaPredicted RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 TTC7AQ9ULT0 858 aaPredicted RBP11.96□□□□□ -0.49
SKA3-206ENST00000475251 ZNF835Q9Y2P0 537 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 MEMO1Q9Y316 297 aa11.96□□□□□ -0.49
SKA3-206ENST00000475251 NCOA6Q14686 2063 aaPredicted RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 H0YGG7 62 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 PRMT5O14744 637 aaPredicted RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 C1orf105O95561 183 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 METTL18O95568 372 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 CELA2AP08217 269 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 PKMP14618 531 aaKnown RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 PSMB5P28074 263 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 EEF1DP29692 281 aaKnown RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 TTPAP49638 278 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 ARF3P61204 181 aaPredicted RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 ALDH6A1Q02252 535 aaKnown RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 SPA17Q15506 151 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 CCDC38Q502W7 563 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 TSTD2Q5T7W7 516 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 PTRHD1Q6GMV3 140 aaKnown RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 CSNK1A1LQ8N752 337 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 HORMAD2Q8N7B1 307 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 FAM71DQ8N9W8 422 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 TMEM178AQ8NBL3 297 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 ADAMTS18Q8TE60 1221 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 PHF10Q8WUB8 498 aaKnown RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 IMMP1LQ96LU5 166 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 DPH7Q9BTV6 452 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 DRC3Q9H069 523 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 PIH1D1Q9NWS0 290 aaKnown RBP11.95□□□□□ -0.5
SKA3-206ENST00000475251 GNPTGQ9UJJ9 305 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 MKL2Q9ULH7 1088 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
SKA3-206ENST00000475251 MED13LQ71F56 2210 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 IQCF5A8MTL0 148 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 A8MUI8 341 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 FAM227AF5H4B4 570 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 C19orf84I3L1E1 186 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 CCNDBP1O95273 360 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 CD46P15529 392 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms