RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 OR4N4Q8N0Y3 316 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 ALKBH8Q96BT7 664 aaKnown RBP22.99■■□□□ 1.27
CPNE1-223ENST00000475146 VPS39Q96JC1 886 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 LRRC1Q9BTT6 524 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 TRIM54Q9BYV2 358 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 PHACTR1Q9C0D0 580 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 SLC25A18Q9H1K4 315 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 PCM1Q15154 2024 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 FER1L5A0AVI2 2057 aa22.99■■□□□ 1.27
CPNE1-223ENST00000475146 COL6A6A6NMZ7 2263 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 TCRBV9S1A1TA0A576 114 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 DSCR3O14972 297 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 ZNF37AP17032 561 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-223ENST00000475146 GCGRP47871 477 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 PMS2P54278 862 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 ZNF425Q6IV72 752 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 AGTRAPQ6RW13 159 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 C3orf62Q6ZUJ4 267 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 C9orf43Q8TAL5 461 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-223ENST00000475146 ATG10Q9H0Y0 220 aa22.98■■□□□ 1.27
CPNE1-223ENST00000475146 CUEDC1Q9NWM3 386 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-223ENST00000475146 PTRH2Q9Y3E5 179 aaKnown RBP22.98■■□□□ 1.27
CPNE1-223ENST00000475146 HYKKA2RU49 373 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 FITM1A5D6W6 292 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 CXorf49A8MYA2 514 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-223ENST00000475146 B8ZZF3 427 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 RFPL1O75677 317 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 GSTA2P09210 222 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 FOLR3P41439 243 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 SLC12A2P55011 1212 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 TAS2R39P59534 338 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 NAE1Q13564 534 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 ZNF460Q14592 562 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 FAM214AQ32MH5 1076 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 FBXO42Q6P3S6 717 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 ZNF605Q86T29 641 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 METTL27Q8N6F8 245 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-223ENST00000475146 TRIM44Q96DX7 344 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-223ENST00000475146 PCBD2Q9H0N5 130 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 ARL15Q9NXU5 204 aa22.97■■□□□ 1.27
CPNE1-223ENST00000475146 ARGFXA6NJG6 315 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 H0YGG7 62 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 KIF2AO00139 706 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-223ENST00000475146 CD63P08962 238 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 EZRP15311 586 aaKnown RBP22.96■■□□□ 1.27
CPNE1-223ENST00000475146 OTX2P32243 289 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 MAGEA4P43358 317 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 GPX6P59796 221 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 ARF3P61204 181 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-223ENST00000475146 ILF2Q12905 390 aaKnown RBP22.96■■□□□ 1.27
CPNE1-223ENST00000475146 TMEM207Q6UWW9 146 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 RAB43Q86YS6 212 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 CTAGE3PQ8IX95 158 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 NKAPQ8N5F7 415 aaKnown RBP22.96■■□□□ 1.27
CPNE1-223ENST00000475146 CSNK1A1LQ8N752 337 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 ADAMTS17Q8TE56 1095 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 RERGQ96A58 199 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-223ENST00000475146 CPNE1Q99829 537 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 ENAMQ9NRM1 1142 aa22.96■■□□□ 1.27
CPNE1-223ENST00000475146 HEMK1Q9Y5R4 338 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-223ENST00000475146 PIEZO2Q9H5I5 2752 aa22.95■■□□□ 1.27
CPNE1-223ENST00000475146 FAM159BA6NKW6 160 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 MKRN2OSH3BPM6 223 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 H7BY64 318 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 HAT1O14929 419 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 GUCA1CO95843 209 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 TUBB4AP04350 444 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 PIM1P11309 404 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-223ENST00000475146 ITGAXP20702 1163 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 AP1S2P56377 157 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 GUCY2DQ02846 1103 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 CHAF1BQ13112 559 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 CPZQ66K79 652 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 APLFQ8IW19 511 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-223ENST00000475146 MNS1Q8NEH6 495 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-223ENST00000475146 ABHD17AQ96GS6 310 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 PDLIM5Q96HC4 596 aaKnown RBP22.95■■□□□ 1.26
CPNE1-223ENST00000475146 CABS1Q96KC9 395 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 PRAP1Q96NZ9 151 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 ZNF71Q9NQZ8 489 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-223ENST00000475146 SLC22A11Q9NSA0 550 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 IKZF3Q9UKT9 509 aa22.95■■□□□ 1.26
CPNE1-223ENST00000475146 NPEPPSL1A6NEC2 478 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 KLF7O75840 302 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-223ENST00000475146 DNAJB5O75953 348 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 ENO2P09104 434 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-223ENST00000475146 CCND1P24385 295 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 GP5P40197 560 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 FOXL2P58012 376 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 MUM1Q2TAK8 710 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 CAPN13Q6MZZ7 669 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-223ENST00000475146 MRPL14Q6P1L8 145 aaKnown RBP22.94■■□□□ 1.26
CPNE1-223ENST00000475146 C17orf64Q86WR6 236 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 PLD3Q8IV08 490 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 CEP97Q8IW35 865 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 DTWD1Q8N5C7 304 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 OR2Y1Q8NGV0 311 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 FKBP10Q96AY3 582 aa22.94■■□□□ 1.26
CPNE1-223ENST00000475146 MCMBPQ9BTE3 642 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms