RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 FITM1A5D6W6 292 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 STMND1H3BQB6 276 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 SRPX2O60687 465 aaPredicted RBP16.25■□□□□ 0.19
SCAF11-206ENST00000474828 IPO13O94829 963 aaKnown RBP16.25■□□□□ 0.19
SCAF11-206ENST00000474828 TIAF1O95411 115 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 FOXM1Q08050 763 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 E2F2Q14209 437 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 PTCHD3Q3KNS1 767 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 ZC3H12BQ5HYM0 836 aaKnown RBP16.25■□□□□ 0.19
SCAF11-206ENST00000474828 SULT1C3Q6IMI6 304 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 UBTD2Q8WUN7 234 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 KLHL25Q9H0H3 589 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 ATG10Q9H0Y0 220 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 ALG9Q9H6U8 611 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 MRPS30Q9NP92 439 aaKnown RBP16.25■□□□□ 0.19
SCAF11-206ENST00000474828 TMEM184CQ9NVA4 438 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 UTP6Q9NYH9 597 aaKnown RBP16.25■□□□□ 0.19
SCAF11-206ENST00000474828 NUDT4Q9NZJ9 180 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 KLHL20Q9Y2M5 609 aa16.25■□□□□ 0.19
SCAF11-206ENST00000474828 CDH16O75309 829 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 STK17BO94768 372 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 GUCA1CO95843 209 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 EZRP15311 586 aaKnown RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 ZNF28P17035 718 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 EMP3P54852 163 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 CLN3Q13286 438 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 TSNAXIP1Q2TAA8 658 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 TECRLQ5HYJ1 363 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 METTL2BQ6P1Q9 378 aaKnown RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 TIPARPQ7Z3E1 657 aaKnown RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 MCATQ8IVS2 390 aaKnown RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 RIBC1Q8N443 379 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 NKD1Q969G9 470 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 OR2A5Q96R48 311 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 TMEM79Q9BSE2 394 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 ACAT2Q9BWD1 397 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 ROPN1BQ9BZX4 212 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 FAM117AQ9C073 453 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 UNKQ9C0B0 810 aaKnown RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 ROPN1Q9HAT0 212 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 FANCEQ9HB96 536 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
SCAF11-206ENST00000474828 COPG2Q9UBF2 871 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 LGALS13Q9UHV8 139 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 SERTAD3Q9UJW9 196 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 SH2B3Q9UQQ2 575 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 SDK2Q58EX2 2172 aa16.24■□□□□ 0.19
SCAF11-206ENST00000474828 ACACAQ13085 2346 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 PABPN1LA6NDY0 278 aaKnown RBP16.23■□□□□ 0.19
SCAF11-206ENST00000474828 SYCE1LA8MT33 242 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 AGRPO00253 132 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 MAP2K7O14733 419 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 TERTO14746 1132 aaKnown RBP16.23■□□□□ 0.19
SCAF11-206ENST00000474828 NRP2O60462 931 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 ONECUT2O95948 504 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 RORAP35398 523 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 ITGA1P56199 1179 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 CSNK1G2P78368 415 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 ZNF385CQ66K41 422 aaPredicted RBP16.23■□□□□ 0.19
SCAF11-206ENST00000474828 TLDC1Q6P9B6 456 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 FRA10AC1Q70Z53 315 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 THOC6Q86W42 341 aaKnown RBP16.23■□□□□ 0.19
SCAF11-206ENST00000474828 ZFAND4Q86XD8 727 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 IQCKQ8N0W5 287 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 ARHGEF39Q8N4T4 335 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 SLC38A9Q8NBW4 561 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 PYCR2Q96C36 320 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 ZFYVE21Q9BQ24 234 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 SYNPO2LQ9H987 977 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 CUEDC1Q9NWM3 386 aaPredicted RBP16.23■□□□□ 0.19
SCAF11-206ENST00000474828 RNF112Q9ULX5 631 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 RAXQ9Y2V3 346 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 AP1M2Q9Y6Q5 423 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 CHD6Q8TD26 2715 aa16.23■□□□□ 0.19
SCAF11-206ENST00000474828 AHCTF1Q8WYP5 2266 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 TMEM150CB9EJG8 249 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 MT-ND3P03897 115 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 CTSBP07858 339 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 GSTA1P08263 222 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 RBP1P09455 135 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 SBK3P0C264 359 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 PRTGQ2VWP7 1150 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 TCTE1Q5JU00 501 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 YOD1Q5VVQ6 348 aaPredicted RBP16.22■□□□□ 0.19
SCAF11-206ENST00000474828 RHBDD2Q6NTF9 364 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 KLC3Q6P597 504 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 C17orf64Q86WR6 236 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 CYP4X1Q8N118 509 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 NEIL2Q969S2 332 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 THAP11Q96EK4 314 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 WDR34Q96EX3 536 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 MED8Q96G25 268 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 VPS11Q9H270 941 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 EHD1Q9H4M9 534 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 CNOT10Q9H9A5 744 aaKnown RBP16.22■□□□□ 0.19
SCAF11-206ENST00000474828 ZNF358Q9NW07 568 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 GPRC5BQ9NZH0 403 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 SLC22A14Q9Y267 594 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 PCM1Q15154 2024 aa16.22■□□□□ 0.19
SCAF11-206ENST00000474828 DSPP15924 2871 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms