RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SMAD2Q15796 467 aaKnown RBP17.38■□□□□ 0.37
VARS2-206ENST00000473916 WLSQ5T9L3 541 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 NOXRED1Q6NXP6 359 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 KBTBD2Q8IY47 623 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 SLC5A11Q8WWX8 675 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 TIMM29Q9BSF4 260 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 XKR8Q9H6D3 395 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 CARS2Q9HA77 564 aaKnown RBP17.38■□□□□ 0.37
VARS2-206ENST00000473916 PRM3Q9NNZ6 103 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 VPS29Q9UBQ0 182 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 EGFL7Q9UHF1 273 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 ANGPTL2Q9UKU9 493 aa17.38■□□□□ 0.37
VARS2-206ENST00000473916 PRSS38A1L453 326 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 PIPSLA2A3N6 862 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 C1GALT1C1LP0DN25 315 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 ERGP11308 486 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 GLULP15104 373 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 RPS13P62277 151 aaKnown RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 TDGQ13569 410 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 ATG9BQ674R7 924 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 NANOGP8Q6NSW7 305 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 DNAJC14Q6Y2X3 702 aaPredicted RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 SPATA24Q86W54 205 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 PGBD3Q8N328 593 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 FRMD1Q8N878 549 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 LINC01555Q8NAE3 123 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 GPR156Q8NFN8 814 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 SLC13A3Q8WWT9 602 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 MAGEB10Q96LZ2 347 aaPredicted RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 FERD3LQ96RJ6 166 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 ZBTB18Q99592 522 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 TRIT1Q9H3H1 467 aaKnown RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 PIF1Q9H611 641 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 NANOGQ9H9S0 305 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 TMEM45AQ9NWC5 275 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 SCHIP1Q9P0W5 487 aaPredicted RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 TAC3Q9UHF0 121 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 ACSL5Q9ULC5 683 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 PCDHGA11Q9Y5H2 935 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 LRP4O75096 1905 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 GON4LQ3T8J9 2241 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 GOLGA4Q13439 2230 aaKnown RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 NPIPB8E9PQR5 432 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 EML2O95834 649 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 PGRP06401 933 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 ATP6V1B2P21281 511 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 MED27Q6P2C8 311 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 NXPE4Q6UWF7 544 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 ENPP7Q6UWV6 458 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 RD3Q7Z3Z2 195 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 IFNEQ86WN2 208 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 TRIM69Q86WT6 500 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 DPP10Q8N608 796 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 CCL4L1Q8NHW4 92 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 C6orf106Q9H6K1 298 aaPredicted RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 SLC2A4RGQ9NR83 387 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 SLC6A13Q9NSD5 602 aa17.37■□□□□ 0.37
VARS2-206ENST00000473916 CUEDC1Q9NWM3 386 aaPredicted RBP17.37■□□□□ 0.37
VARS2-206ENST00000473916 ARHGEF17Q96PE2 2063 aaPredicted RBP17.36■□□□□ 0.37
VARS2-206ENST00000473916 VCANP13611 3396 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 PDZK1P1A8MUH7 402 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 SAP18O00422 153 aaKnown RBP17.36■□□□□ 0.37
VARS2-206ENST00000473916 AKAP10O43572 662 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 DFNA5O60443 496 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 IL9P15248 144 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 AK4P27144 223 aaPredicted RBP17.36■□□□□ 0.37
VARS2-206ENST00000473916 VHLP40337 213 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 CLDN8P56748 225 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 MTPNP58546 118 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 RAE1P78406 368 aaKnown RBP17.36■□□□□ 0.37
VARS2-206ENST00000473916 FOXM1Q08050 763 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 ANO7Q6IWH7 933 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 PRMT9Q6P2P2 845 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 GCNT7Q6ZNI0 430 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 C1orf52Q8N6N3 182 aaKnown RBP17.36■□□□□ 0.37
VARS2-206ENST00000473916 OR2T34Q8NGX1 318 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 FAM110BQ8TC76 370 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 GTF2H4Q92759 462 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 TSACCQ96A04 125 aaPredicted RBP17.36■□□□□ 0.37
VARS2-206ENST00000473916 WDR34Q96EX3 536 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 SCARF2Q96GP6 870 aaPredicted RBP17.36■□□□□ 0.37
VARS2-206ENST00000473916 FCRL1Q96LA6 429 aa17.36■□□□□ 0.37
VARS2-206ENST00000473916 A0A1W2PPV9 198 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 CHRNB1P11230 501 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 GCKP35557 465 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 GSK3BP49841 420 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 GAS6Q14393 721 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 LRRC36Q1X8D7 754 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 GTDC1Q4AE62 458 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 LPCAT4Q643R3 524 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 ANKRD46Q86W74 232 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 CDC26Q8NHZ8 85 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 JPH3Q8WXH2 748 aaPredicted RBP17.35■□□□□ 0.37
VARS2-206ENST00000473916 C11orf24Q96F05 449 aaPredicted RBP17.35■□□□□ 0.37
VARS2-206ENST00000473916 RMI1Q9H9A7 625 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 VAPAQ9P0L0 249 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 USP36Q9P275 1121 aaKnown RBP17.35■□□□□ 0.37
VARS2-206ENST00000473916 CYP8B1Q9UNU6 501 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 KNL1Q8NG31 2342 aa17.35■□□□□ 0.37
VARS2-206ENST00000473916 FPGTO14772 594 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms