RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ACTRT1Q8TDG2 376 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 ZNF480Q8WV37 535 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 INPP5DQ92835 1189 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 LRRC4CQ9HCJ2 640 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 FBXO6Q9NRD1 293 aaPredicted RBP14.59□□□□□ -0.07
VTI1A-203ENST00000472892 STOX2Q9P2F5 926 aaPredicted RBP14.59□□□□□ -0.07
VTI1A-203ENST00000472892 ZNF282Q9UDV7 671 aaPredicted RBP14.59□□□□□ -0.07
VTI1A-203ENST00000472892 DHRS7Q9Y394 339 aa14.59□□□□□ -0.07
VTI1A-203ENST00000472892 PRRC2CQ9Y520 2896 aaKnown RBP14.59□□□□□ -0.07
VTI1A-203ENST00000472892 RP1L1Q8IWN7 2480 aaPredicted RBP14.58□□□□□ -0.07
VTI1A-203ENST00000472892 IGLV3-12A0A075B6K2 115 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 ZNF839A8K0R7 811 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 E7ENX8 843 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 KIF5CO60282 957 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 AGFG2O95081 481 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 SLC16A8O95907 504 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 F7P08709 466 aaPredicted RBP14.58□□□□□ -0.08
VTI1A-203ENST00000472892 ZGLP1P0C6A0 271 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 MPC1LP0DKB6 136 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 ITGA3P26006 1051 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 TAP2Q03519 686 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 OCA2Q04671 838 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 KLC1Q07866 573 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 LONRF1Q17RB8 773 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 ICE2Q659A1 982 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 IGFL2Q6UWQ7 119 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 LRRC56Q8IYG6 542 aaPredicted RBP14.58□□□□□ -0.08
VTI1A-203ENST00000472892 CISD2Q8N5K1 135 aaKnown RBP14.58□□□□□ -0.08
VTI1A-203ENST00000472892 OR11G2Q8NGC1 345 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 STT3BQ8TCJ2 826 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 CALML6Q8TD86 181 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 COG1Q8WTW3 980 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 VPS50Q96JG6 964 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 C10orf90Q96M02 699 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 OR2A5Q96R48 311 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 BARD1Q99728 777 aaKnown RBP14.58□□□□□ -0.08
VTI1A-203ENST00000472892 SLC29A3Q9BZD2 475 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 CCDC68Q9H2F9 335 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 SYNPO2LQ9H987 977 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 C20orf96Q9NUD7 363 aaPredicted RBP14.58□□□□□ -0.08
VTI1A-203ENST00000472892 ASF1BQ9NVP2 202 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 UTP6Q9NYH9 597 aaKnown RBP14.58□□□□□ -0.08
VTI1A-203ENST00000472892 TAC3Q9UHF0 121 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 COMMD10Q9Y6G5 202 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 NAV2Q8IVL1 2488 aa14.58□□□□□ -0.08
VTI1A-203ENST00000472892 PGRMC1O00264 195 aaKnown RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 ZBTB14O43829 449 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 SEMA7AO75326 666 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 ALOX12BO75342 701 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 VPS26AO75436 327 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 HAUS5O94927 633 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CCNDBP1O95273 360 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CBX6O95503 412 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 ERVK-10P10266 1014 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 ENO3P13929 434 aaPredicted RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 SKIV2L2P42285 1042 aaKnown RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 SLC1A2P43004 574 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CARSP49589 748 aaKnown RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 ABATP80404 500 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 MRPL49Q13405 166 aaKnown RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CUL1Q13616 776 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 RBBP7Q16576 425 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 EIF2S3LQ2VIR3 472 aaKnown RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 TUBB8Q3ZCM7 444 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 AGAP7PQ5VUJ5 663 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 ATG9BQ674R7 924 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CUZD1Q86UP6 607 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 SPNS2Q8IVW8 549 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 MIEF2Q96C03 454 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 MVB12AQ96EY5 273 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 AGAP4Q96P64 663 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 OSBPL9Q96SU4 736 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 GPR21Q99679 349 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CRB3Q9BUF7 120 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 LHPPQ9H008 270 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 ILKAPQ9H0C8 392 aaPredicted RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CUEDC1Q9NWM3 386 aaPredicted RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 MAP10Q9P2G4 905 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 FBXO5Q9UKT4 447 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 CDC14AQ9UNH5 594 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 RUVBL1Q9Y265 456 aaKnown RBP14.57□□□□□ -0.08
VTI1A-203ENST00000472892 MAD1L1Q9Y6D9 718 aa14.57□□□□□ -0.08
VTI1A-203ENST00000472892 EZRP15311 586 aaKnown RBP14.56□□□□□ -0.08
VTI1A-203ENST00000472892 SLC26A3P40879 764 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 FNTAP49354 379 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 Q0VFX4 171 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 TSTA3Q13630 321 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-203ENST00000472892 DSG2Q14126 1118 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 HSP90AA5PQ58FG0 334 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 VWA2Q5GFL6 755 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 GARNL3Q5VVW2 1013 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 LAPTM4BQ86VI4 370 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 PARP9Q8IXQ6 854 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 PPIL6Q8IXY8 311 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 ARHGEF39Q8N4T4 335 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 CSNK1A1LQ8N752 337 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 PPFIBP2Q8ND30 876 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 CD200R1Q8TD46 325 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 PPP4R1Q8TF05 950 aa14.56□□□□□ -0.08
VTI1A-203ENST00000472892 GRK7Q8WTQ7 553 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms