RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 AGXTP21549 392 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 LPOP22079 712 aaPredicted RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 PTPN4P29074 926 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 HADHAP40939 763 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 PRKCIP41743 596 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SSR1P43307 286 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 POLD2P49005 469 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 COL10A1Q03692 680 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 DMPKQ09013 629 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 KLHL30Q0D2K2 578 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ERV3-1Q14264 604 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 PDK1Q15118 436 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SMTNL2Q2TAL5 461 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ZRANB3Q5FWF4 1079 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 DNTTIP2Q5QJE6 756 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 LDLRAP1Q5SW96 308 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 VWA5B1Q5TIE3 1220 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CACHD1Q5VU97 1274 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 KCTD16Q68DU8 428 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CAPRIN2Q6IMN6 1127 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 IRGCQ6NXR0 463 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ZNF449Q6P9G9 518 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 TIPARPQ7Z3E1 657 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 PHLDB2Q86SQ0 1253 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 TSPAN33Q86UF1 283 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 AMZ2Q86W34 360 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 TRAPPC5Q8IUR0 188 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 TMEM126BQ8IUX1 230 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 LURAP1LQ8IV03 231 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CNTD1Q8N815 330 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CLEC1AQ8NC01 280 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 LPCAT1Q8NF37 534 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 HEXDCQ8WVB3 486 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 PIH1D2Q8WWB5 315 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 PATE1Q8WXA2 126 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ST8SIA2Q92186 375 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 MAML1Q92585 1016 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SYN2Q92777 582 aaPredicted RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 SCAMP4Q969E2 229 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 GLYATL1Q969I3 302 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 HDAC11Q96DB2 347 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 RAX2Q96IS3 184 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SLC41A2Q96JW4 573 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 FER1L6-AS2Q96M78 137 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 C5orf34Q96MH7 638 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 AGAP3Q96P47 875 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 TSGA13Q96PP4 275 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 PCDHB18PQ96TA0 734 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CTRCQ99895 268 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 RIOK2Q9BVS4 552 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 NUP85Q9BW27 656 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SPATA16Q9BXB7 569 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 GPR63Q9BZJ6 419 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SPRY4Q9C004 299 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 OR2AG1Q9H205 316 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 MAGEE1Q9HCI5 957 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 AGPAT4Q9NRZ5 378 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 KLC4Q9NSK0 619 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 RBM22Q9NW64 420 aaKnown RBP eCLIP3.41□□□□□ -1.86
XRN1-209ENST00000472625 GPATCH2LQ9NWQ4 482 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 GPR83Q9NYM4 423 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CWC15Q9P013 229 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 TMEM9Q9P0T7 183 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SEMA5BQ9P283 1151 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 C5AR2Q9P296 337 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 UVRAGQ9P2Y5 699 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 TBC1D29Q9UFV1 150 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 CD84Q9UIB8 345 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ANAPC7Q9UJX3 599 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 ACSL5Q9ULC5 683 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SNX7Q9UNH6 387 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 KCNK6Q9Y257 313 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 TMEM98Q9Y2Y6 226 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 COLEC10Q9Y6Z7 277 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 DOCK4Q8N1I0 1966 aa3.41□□□□□ -1.86
XRN1-209ENST00000472625 SPTAN1Q13813 2472 aaKnown RBP3.41□□□□□ -1.86
XRN1-209ENST00000472625 CHD5Q8TDI0 1954 aa3.4□□□□□ -1.86
XRN1-209ENST00000472625 CCDC78A2IDD5 438 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 OR5K3A6NET4 321 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 LRRC53A6NM62 1247 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 TMCO5BA8MYB1 307 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 QSOX1O00391 747 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 IFRD1O00458 451 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 PEX12O00623 359 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 EPHB6O15197 1021 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CASC3O15234 703 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 MFSD11O43934 449 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 NRP2O60462 931 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SORBS2O94875 1100 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 TMEM63AO94886 807 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CLDN7O95471 211 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ATP1A1P05023 1023 aaKnown RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 TPM1P09493 284 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 SLC35G4P0C7Q5 338 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 OSMP13725 252 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ZNF7P17097 686 aaPredicted RBP3.4□□□□□ -1.87
XRN1-209ENST00000472625 HLA-DPA1P20036 260 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 ITGAXP20702 1163 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 CYP2A7P20853 494 aa3.4□□□□□ -1.87
XRN1-209ENST00000472625 AKT1P31749 480 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms