RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TM4SF5O14894 197 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 NPHS1O60500 1241 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 CRCPO75575 148 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 RPS17P08708 135 aaKnown RBP16.23■□□□□ 0.19
CCM2-205ENST00000472223 FTH1P19P0C7X4 201 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 PEBP1P30086 187 aaKnown RBP16.23■□□□□ 0.19
CCM2-205ENST00000472223 ATP1A2P50993 1020 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 GFERP55789 205 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 STX3Q13277 289 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 CHI3L2Q15782 390 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 UNC50Q53HI1 259 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 CYB5D1Q6P9G0 228 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 NXPE4Q6UWF7 544 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 MILR1Q7Z6M3 343 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 TMPRSS11BQ86T26 416 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 RAB3IL1Q8TBN0 382 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 LRRC8CQ8TDW0 803 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 TRPC4APQ8TEL6 797 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 ZNF483Q8TF39 744 aaPredicted RBP16.23■□□□□ 0.19
CCM2-205ENST00000472223 NEIL2Q969S2 332 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 UBE2E3Q969T4 207 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 TCTN2Q96GX1 697 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 DEPDC7Q96QD5 511 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 OR4K3Q96R72 315 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 MAP3K3Q99759 626 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 DPH7Q9BTV6 452 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 PELI2Q9HAT8 420 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 PDE7BQ9NP56 450 aa16.23■□□□□ 0.19
CCM2-205ENST00000472223 SLC9B1P1A6NJY1 282 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 TMEM114B3SHH9 223 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 H7BY64 318 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 HGSO14964 777 aaPredicted RBP16.22■□□□□ 0.19
CCM2-205ENST00000472223 UGDHO60701 494 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 KCNK5O95279 499 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 SERPINE1P05121 402 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 C1GALT1C1LP0DN25 315 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 CDH1P12830 882 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 HOXB3P14651 431 aaPredicted RBP16.22■□□□□ 0.19
CCM2-205ENST00000472223 MPSTP25325 297 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 CSF2RBP32927 897 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 CSTF2P33240 577 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCM2-205ENST00000472223 INHBCP55103 352 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 CDH13P55290 713 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 PKNOX1P55347 436 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 WDR4P57081 412 aaKnown RBP16.22■□□□□ 0.19
CCM2-205ENST00000472223 HSD11B2P80365 405 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 LCP2Q13094 533 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 CHIT1Q13231 466 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 ZC3H12BQ5HYM0 836 aaKnown RBP16.22■□□□□ 0.19
CCM2-205ENST00000472223 KIAA1614Q5VZ46 1190 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 LIPJQ5W064 366 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 FIGLAQ6QHK4 219 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 PRSS42Q7Z5A4 293 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 TRIM73Q86UV7 250 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 KIRREL3Q8IZU9 778 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 REPS1Q96D71 796 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 PTCD3Q96EY7 689 aaKnown RBP16.22■□□□□ 0.19
CCM2-205ENST00000472223 PRAP1Q96NZ9 151 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 EFCAB11Q9BUY7 163 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 GATA5Q9BWX5 397 aaPredicted RBP16.22■□□□□ 0.19
CCM2-205ENST00000472223 PITPNM3Q9BZ71 974 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 EHD1Q9H4M9 534 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 MANSC1Q9H8J5 431 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 FANCEQ9HB96 536 aa16.22■□□□□ 0.19
CCM2-205ENST00000472223 LRRC14BA6NHZ5 514 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 E7EQ34 232 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 CLDN9O95484 217 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 HSPA4LO95757 839 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 EBLN1P0CF75 366 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 MAGP20916 626 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 BGNP21810 368 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 HNF4AP41235 474 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 GRIA3P42263 894 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 MLLT3P42568 568 aaPredicted RBP16.21■□□□□ 0.19
CCM2-205ENST00000472223 SEPHS1P49903 392 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 PPP1CAP62136 330 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 INSM1Q01101 510 aaPredicted RBP16.21■□□□□ 0.19
CCM2-205ENST00000472223 RCN2Q14257 317 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 ZXDCQ2QGD7 858 aaPredicted RBP16.21■□□□□ 0.19
CCM2-205ENST00000472223 ATG9BQ674R7 924 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 TTC19Q6DKK2 380 aaPredicted RBP16.21■□□□□ 0.19
CCM2-205ENST00000472223 DHRS13Q6UX07 377 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 FRMD7Q6ZUT3 714 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 AFAP1L2Q8N4X5 818 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 C19orf47Q8N9M1 422 aaKnown RBP16.21■□□□□ 0.19
CCM2-205ENST00000472223 ABHD11Q8NFV4 315 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 GRAMD1AQ96CP6 724 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 CCDC74BQ96LY2 380 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 TRAPPC9Q96Q05 1148 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 NTMT1Q9BV86 223 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 PITHD1Q9GZP4 211 aaPredicted RBP16.21■□□□□ 0.19
CCM2-205ENST00000472223 TWSG1Q9GZX9 223 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 ASB1Q9Y576 335 aa16.21■□□□□ 0.19
CCM2-205ENST00000472223 GVINP1Q7Z2Y8 2422 aa16.2■□□□□ 0.18
CCM2-205ENST00000472223 IGHV5-10-1A0A0J9YXX1 117 aa16.2■□□□□ 0.18
CCM2-205ENST00000472223 KIF1CO43896 1103 aaKnown RBP16.2■□□□□ 0.18
CCM2-205ENST00000472223 MT-CO3P00414 261 aa16.2■□□□□ 0.18
CCM2-205ENST00000472223 ANKRD34CP0C6C1 535 aa16.2■□□□□ 0.18
CCM2-205ENST00000472223 THRAP10827 490 aa16.2■□□□□ 0.18
CCM2-205ENST00000472223 FGF3P11487 239 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms