RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 DGCR6LQ9BY27 220 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 UBE2ZQ9H832 354 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 CTPS2Q9NRF8 586 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 SSR3Q9UNL2 185 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 ROBO3Q96MS0 1386 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 A0A1W2PRB8 838 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 C2orf78A6NCI8 922 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 HCRTR2O43614 444 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 AP2A1O95782 977 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SUSD1Q6UWL2 747 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 THOC6Q86W42 341 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 DCAF4L2Q8NA75 395 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ZNF540Q8NDQ6 660 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 OR2L8Q8NGY9 312 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 CNDP2Q96KP4 475 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 ADAD1Q96M93 576 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 DUSP9Q99956 384 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 B3GNT4Q9C0J1 378 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SEMA4AQ9H3S1 761 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 TEX13CA0A0J9YWL9 993 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PLK4O00444 970 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 E2F3O00716 465 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 NME6O75414 186 aaPredicted RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 CD2P06729 351 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ACADSP16219 412 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PTX3P26022 381 aaPredicted RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 ZNF33BQ06732 778 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 TRIM16LQ309B1 348 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 WDR93Q6P2C0 686 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ANKRD46Q86W74 232 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 CCDC116Q8IYX3 515 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 FAM47BQ8NA70 645 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 OR10H4Q8NGA5 316 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 OR9A1PQ8NGU1 263 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 OR52J3Q8NH60 311 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 TWIST2Q8WVJ9 160 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PYCR2Q96C36 320 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 LENG8Q96PV6 779 aaPredicted RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 UCK2Q9BZX2 261 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 AGPAT4Q9NRZ5 378 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 KCNS2Q9ULS6 477 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 LOC102723532A0A0G2JNH3 316 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 C2orf71A6NGG8 1288 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 BTNL10A8MVZ5 291 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 GDF1P27539 372 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 NMBRP28336 390 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 YAP1P46937 504 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 SHHQ15465 462 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ESCO2Q56NI9 601 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 NCEH1Q6PIU2 408 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 BBS12Q6ZW61 710 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SPATC1Q76KD6 591 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 DHDDSQ86SQ9 333 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 TDRPQ86YL5 185 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SLC34A3Q8N130 599 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 OR13C4Q8NGS5 318 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 GATAD2BQ8WXI9 593 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 NUMBLQ9Y6R0 609 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 BLOC1S5-TXNDC5H3BN57 136 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 RTCAO00442 366 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 TRIM38O00635 465 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 FASLGP48023 281 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 MED22Q15528 200 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ZER1Q7Z7L7 766 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SERINC5Q86VE9 423 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PLCZ1Q86YW0 608 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ZNF567Q8N184 647 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 CHTF18Q8WVB6 975 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 NXNL1Q96CM4 212 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 NUAK2Q9H093 628 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PARPBPQ9NWS1 579 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 EHD3Q9NZN3 535 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 GRHPRQ9UBQ7 328 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 RPH3AQ9Y2J0 694 aaPredicted RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 RAP2CQ9Y3L5 183 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PCDHGB1Q9Y5G3 927 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 ZNF878C9JN71 531 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 LOC110117498-PIK3R3F6TDL0 507 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 JUNP05412 331 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 NR2F6P10588 404 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 DBTP11182 482 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 CDH1P12830 882 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ZNF3P17036 446 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ETV3P41162 512 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 CLCQ05315 142 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 EEF1A2Q05639 463 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 TAB1Q15750 504 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 OCLNQ16625 522 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 MZT2BQ6NZ67 158 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SLC2A7Q6PXP3 512 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 QSOX2Q6ZRP7 698 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SFRP1Q8N474 314 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 PIK3R3Q92569 461 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 FAM122AQ96E09 287 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 SPAG4Q9NPE6 437 aa8.35□□□□□ -1.07
CD47-204ENST00000471694 ZCCHC3Q9NUD5 404 aaKnown RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 CORO1CQ9ULV4 474 aaPredicted RBP8.35□□□□□ -1.07
CD47-204ENST00000471694 OR1I1O60431 355 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms