RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 FLNBO75369 2602 aaKnown RBP12.93□□□□□ -0.34
HMGN1-211ENST00000471260 FER1L5A0AVI2 2057 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 A0A1W2PPV9 198 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CTSBP07858 339 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 ENO3P13929 434 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-211ENST00000471260 VARSP26640 1264 aaKnown RBP12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CMPK1P30085 196 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CCT5P48643 541 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CLCN7P51798 805 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 PPP2R2AP63151 447 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 ATP1A4Q13733 1029 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CCSMST1Q4G0I0 132 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 ZNF470Q6ECI4 717 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CEP128Q6ZU80 1094 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 TTLL10Q6ZVT0 673 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 OVCH1Q7RTY7 1134 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 PCGF5Q86SE9 256 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 MRGPREQ86SM8 312 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 TAX1BP1Q86VP1 789 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 ATCAYQ86WG3 371 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CLEC1AQ8NC01 280 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 FDCSPQ8NFU4 85 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 SMPDL3AQ92484 453 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 PGM2Q96G03 612 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 SIGLEC10Q96LC7 697 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 MIPEPQ99797 713 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 SLC26A1Q9H2B4 701 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 WDR54Q9H977 334 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CUTCQ9NTM9 273 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 ZDHHC18Q9NUE0 388 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 UTP6Q9NYH9 597 aaKnown RBP12.93□□□□□ -0.34
HMGN1-211ENST00000471260 CIDEBQ9UHD4 219 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 NXT1Q9UKK6 140 aaKnown RBP12.93□□□□□ -0.34
HMGN1-211ENST00000471260 FAM169AQ9Y6X4 670 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 ANKRD12Q6UB98 2062 aa12.93□□□□□ -0.34
HMGN1-211ENST00000471260 OR2A25A4D2G3 310 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 GOLGA8MH3BSY2 632 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 EIF3FO00303 357 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-211ENST00000471260 IPO13O94829 963 aaKnown RBP12.92□□□□□ -0.34
HMGN1-211ENST00000471260 MPC1LP0DKB6 136 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 OTX2P32243 289 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 EMP3P54852 163 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 SOX8P57073 446 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 MRPS25P82663 173 aaKnown RBP12.92□□□□□ -0.34
HMGN1-211ENST00000471260 RELAQ04206 551 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 CTBP1Q13363 440 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 IGFBP7Q16270 282 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 ACSBG2Q5FVE4 666 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 FAM69BQ5VUD6 431 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 TENM4Q6N022 2769 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 PRMT9Q6P2P2 845 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 RNF44Q7L0R7 432 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-211ENST00000471260 TLCD1Q96CP7 247 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 VPS50Q96JG6 964 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 FAM167BQ9BTA0 163 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 NAT9Q9BTE0 207 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 SLC22A11Q9NSA0 550 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 C20orf96Q9NUD7 363 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-211ENST00000471260 GALPQ9UBC7 116 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 RUVBL2Q9Y230 463 aaKnown RBP12.92□□□□□ -0.34
HMGN1-211ENST00000471260 DHRS7Q9Y394 339 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 MAD1L1Q9Y6D9 718 aa12.92□□□□□ -0.34
HMGN1-211ENST00000471260 ASH1LQ9NR48 2969 aaKnown RBP12.92□□□□□ -0.34
HMGN1-211ENST00000471260 PCM1Q15154 2024 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 NBASA2RRP1 2371 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 TTLL8A6PVC2 850 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 ARHGEF33A8MVX0 844 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 NDC80O14777 642 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 ZBTB14O43829 449 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 CTSVO60911 334 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 VPS26AO75436 327 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 CCNDBP1O95273 360 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 TTC4O95801 387 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 ALPPP05187 535 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 UMODP07911 640 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 MMP11P24347 488 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 PSMB5P28074 263 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 SLC1A2P43004 574 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 CAV1Q03135 178 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 DHX9Q08211 1270 aaKnown RBP12.91□□□□□ -0.34
HMGN1-211ENST00000471260 IFFO1Q0D2I5 559 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 PTK6Q13882 451 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 PPP1R7Q15435 360 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-211ENST00000471260 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.91□□□□□ -0.34
HMGN1-211ENST00000471260 DCAF10Q5QP82 559 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 WASHC2DQ5SRD0 308 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 RNASEH2BQ5TBB1 312 aaKnown RBP12.91□□□□□ -0.34
HMGN1-211ENST00000471260 VWA5B1Q5TIE3 1220 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 LRRC8EQ6NSJ5 796 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 UGT3A1Q6NUS8 523 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 DENND6AQ8IWF6 608 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 C10orf67Q8IYJ2 551 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
HMGN1-211ENST00000471260 ASB11Q8WXH4 323 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 INPP5DQ92835 1189 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 FAM136AQ96C01 138 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 ZFYVE21Q9BQ24 234 aa12.91□□□□□ -0.34
HMGN1-211ENST00000471260 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms