RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DCTP40126 519 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 CDKN1CP49918 316 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-206ENST00000471037 TMED2Q15363 201 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 NR6A1Q15406 480 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 DBN1Q16643 649 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 PTCHD3Q3KNS1 767 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF658BQ4V348 819 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-206ENST00000471037 HSP90B2PQ58FF3 399 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 AGBL2Q5U5Z8 902 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF787Q6DD87 383 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 CNSTQ6PJW8 725 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 MRGPREQ86SM8 312 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 LDB1Q86U70 411 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-206ENST00000471037 TICAM1Q8IUC6 712 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 LILRA3Q8N6C8 439 aaPredicted RBP8.74□□□□□ -1.01
SF3A1-206ENST00000471037 LCN9Q8WX39 176 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 LPGAT1Q92604 370 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 C19orf60Q96EN9 201 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 TRAPPC9Q96Q05 1148 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 COPS8Q99627 209 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 GPR22Q99680 433 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 BARD1Q99728 777 aaKnown RBP8.74□□□□□ -1.01
SF3A1-206ENST00000471037 C17orf62Q9BQA9 187 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 OR52A5Q9H2C5 316 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 CCDC68Q9H2F9 335 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 SRMSQ9H3Y6 488 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 TFB2MQ9H5Q4 396 aaKnown RBP8.74□□□□□ -1.01
SF3A1-206ENST00000471037 FAM96AQ9H5X1 160 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 MED4Q9NPJ6 270 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 ASF1BQ9NVP2 202 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 SENP1Q9P0U3 644 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 CTNNAL1Q9UBT7 734 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 FAM8A1Q9UBU6 413 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 SERTAD3Q9UJW9 196 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 SLC5A6Q9Y289 635 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 B3GNT3Q9Y2A9 372 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 COMMD10Q9Y6G5 202 aa8.74□□□□□ -1.01
SF3A1-206ENST00000471037 ITPR2Q14571 2701 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 GSAPA4D1B5 854 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 TRIM49D1C9J1S8 452 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 H3BMH7 237 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 H3BMM5 538 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 QSOX1O00391 747 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 BTN3A3O00478 584 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 BTN3A1O00481 513 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 MAP3K7O43318 606 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF749O43361 778 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 HAUS5O94927 633 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 IGHEP01854 428 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 ESR1P03372 595 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 ALPPP05187 535 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 RALBP11234 206 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 KRT15P19012 456 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 AGXTP21549 392 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 COL8A1P27658 744 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 NSG1P42857 185 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 SOX8P57073 446 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 POU4F1Q01851 419 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 KRT33BQ14525 404 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 SSPNQ14714 243 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 MYBPC3Q14896 1274 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 PLEKHN1Q494U1 663 aaPredicted RBP8.73□□□□□ -1.01
SF3A1-206ENST00000471037 TNFAIP8L3Q5GJ75 292 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 CRB2Q5IJ48 1285 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 DCAF10Q5QP82 559 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 MROH9Q5TGP6 573 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 FAM45BPQ6NSW5 357 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 RHBDD2Q6NTF9 364 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 TIFABQ6ZNK6 161 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 CDHR3Q6ZTQ4 885 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 MICALCLQ6ZW33 695 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 CFAP206Q8IYR0 622 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 CLEC1AQ8NC01 280 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 OR52E1Q8NGJ3 308 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 FAM45AQ8TCE6 357 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 NAT14Q8WUY8 206 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 ISL2Q96A47 359 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 TSPAN17Q96FV3 270 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 DCUN1D1Q96GG9 259 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 FER1L6-AS2Q96M78 137 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 C5orf34Q96MH7 638 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 CHRNA10Q9GZZ6 450 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 CENPHQ9H3R5 247 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 MVB12BQ9H7P6 319 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 COG4Q9H9E3 785 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 TBK1Q9UHD2 729 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 GNPTGQ9UJJ9 305 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 CRYL1Q9Y2S2 319 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 ACTL7BQ9Y614 415 aa8.73□□□□□ -1.01
SF3A1-206ENST00000471037 FAM95CA0A1B0GW59 222 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 HMX2A2RU54 273 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 ANKUB1A6NFN9 424 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 C2orf74A8MZ97 194 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 HMGB1P1B2RPK0 211 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 IFRD1O00458 451 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 IPO13O94829 963 aaKnown RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 AP2A2O94973 939 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 CD63P08962 238 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 PKMP14618 531 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms