RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ARF3P61204 181 aaPredicted RBP11.04□□□□□ -0.64
CDHR3-205ENST00000468143 SLC7A5Q01650 507 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 PHKG1Q16816 387 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 FAM45BPQ6NSW5 357 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 MRPL14Q6P1L8 145 aaKnown RBP11.04□□□□□ -0.64
CDHR3-205ENST00000468143 TMEM207Q6UWW9 146 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 SHISA6Q6ZSJ9 500 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 RNF44Q7L0R7 432 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 GALNT7Q86SF2 657 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 PAQR7Q86WK9 346 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 FAM45AQ8TCE6 357 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 CCDC138Q96M89 665 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 ZNF285Q96NJ3 590 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 PRAP1Q96NZ9 151 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 ZFYVE21Q9BQ24 234 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 DHRS4Q9BTZ2 278 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 PARVBQ9HBI1 364 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 IKZF3Q9UKT9 509 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 PADI2Q9Y2J8 665 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 UTP11Q9Y3A2 253 aaKnown RBP11.04□□□□□ -0.64
CDHR3-205ENST00000468143 KLK4Q9Y5K2 254 aa11.04□□□□□ -0.64
CDHR3-205ENST00000468143 FAM95CA0A1B0GW59 222 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 FITM1A5D6W6 292 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 CXorf49A8MYA2 514 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 J3QKU1 62 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 NDC80O14777 642 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 HAT1O14929 419 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 DSCR3O14972 297 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 SUV39H1O43463 412 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 CCNDBP1O95273 360 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 GUCA1CO95843 209 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 HIST1H2AGP0C0S8 130 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 HIST1H2ADP20671 130 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 NAE1Q13564 534 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 FRG1Q14331 258 aaKnown RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 ZNF460Q14592 562 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 SSPNQ14714 243 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 HKDC1Q2TB90 917 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 FAM214AQ32MH5 1076 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 LACTB2Q53H82 288 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 ZNF425Q6IV72 752 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 LRRC8EQ6NSJ5 796 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 AGTRAPQ6RW13 159 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 COX15Q7KZN9 410 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 OVCH1Q7RTY7 1134 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 ZC3HC1Q86WB0 502 aaKnown RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 APLFQ8IW19 511 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 COL26A1Q96A83 441 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 PTERQ96BW5 349 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 HIST1H2AHQ96KK5 128 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 OR2A5Q96R48 311 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 HIST1H2AJQ99878 128 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 C17orf62Q9BQA9 187 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 H2AFJQ9BTM1 129 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 CCDC177Q9NQR7 707 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 UTP6Q9NYH9 597 aaKnown RBP11.03□□□□□ -0.64
CDHR3-205ENST00000468143 SH2B3Q9UQQ2 575 aa11.03□□□□□ -0.64
CDHR3-205ENST00000468143 ESYT3A0FGR9 886 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 FFAR3O14843 346 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 SLC16A5O15375 505 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 GPR42O15529 346 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 UMODP07911 640 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 PIM1P11309 404 aaPredicted RBP11.02□□□□□ -0.65
CDHR3-205ENST00000468143 TAS2R39P59534 338 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 TBPL1P62380 186 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ABATP80404 500 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 RAPSNQ13702 412 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 NAA25Q14CX7 972 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ZXDCQ2QGD7 858 aaPredicted RBP11.02□□□□□ -0.65
CDHR3-205ENST00000468143 PRAMEF13Q5VWM6 474 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ZDHHC24Q6UX98 284 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 C3orf62Q6ZUJ4 267 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ASB18Q6ZVZ8 466 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 SLC26A11Q86WA9 606 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 RAB43Q86YS6 212 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 CEP97Q8IW35 865 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 PRSS58Q8IYP2 241 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 CSNK1A1LQ8N752 337 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 OR2Y1Q8NGV0 311 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 FBXO25Q8TCJ0 367 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 PYCR2Q96C36 320 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 CABS1Q96KC9 395 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 MACROD1Q9BQ69 325 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 SLC25A23Q9BV35 468 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 YIPF2Q9BWQ6 316 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 UNKQ9C0B0 810 aaKnown RBP11.02□□□□□ -0.65
CDHR3-205ENST00000468143 RAB17Q9H0T7 212 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 SOX17Q9H6I2 414 aaPredicted RBP11.02□□□□□ -0.65
CDHR3-205ENST00000468143 CAB39LQ9H9S4 337 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ZNF304Q9HCX3 659 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ARL15Q9NXU5 204 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 ANKMY1Q9P2S6 941 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 CDC23Q9UJX2 597 aa11.02□□□□□ -0.65
CDHR3-205ENST00000468143 CORO1CQ9ULV4 474 aaPredicted RBP11.02□□□□□ -0.65
CDHR3-205ENST00000468143 RUVBL1Q9Y265 456 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms