RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GRIA3P42263 894 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 LSSP48449 732 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 PDX1P52945 283 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 PPP2R2AP63151 447 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 HSD11B2P80365 405 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 GTF2H2Q13888 395 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 ISXQ2M1V0 245 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 GTF2H2CQ6P1K8 395 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 GOLGA7Q7Z5G4 137 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 ARHGAP22Q7Z5H3 698 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 B3GNT8Q7Z7M8 397 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 FAM20CQ8IXL6 584 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 GALNT15Q8N3T1 639 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 DCBLD1Q8N8Z6 715 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 C19orf47Q8N9M1 422 aaKnown RBP14.63□□□□□ -0.07
SNIP1-202ENST00000468040 ABHD11Q8NFV4 315 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 ZNF483Q8TF39 744 aaPredicted RBP14.63□□□□□ -0.07
SNIP1-202ENST00000468040 KLHL6Q8WZ60 621 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 TCTN2Q96GX1 697 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 SLC41A2Q96JW4 573 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 PPM1MQ96MI6 270 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 DPH7Q9BTV6 452 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 CHRNA10Q9GZZ6 450 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 EHD1Q9H4M9 534 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 SLC6A20Q9NP91 592 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 TMEM184CQ9NVA4 438 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 SOHLH2Q9NX45 425 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 STK38LQ9Y2H1 464 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 CEP250Q9BV73 2442 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 PIEZO1Q92508 2521 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 LRRC14BA6NHZ5 514 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 H2AFYO75367 372 aaKnown RBP14.62□□□□□ -0.07
SNIP1-202ENST00000468040 MLYCDO95822 493 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 CDH1P12830 882 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 PVRP15151 417 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 NELFEP18615 380 aaKnown RBP14.62□□□□□ -0.07
SNIP1-202ENST00000468040 NR1D1P20393 614 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 CSTF2P33240 577 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNIP1-202ENST00000468040 SEPHS1P49903 392 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 CCR8P51685 355 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 NAGLUP54802 743 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 RELAQ04206 551 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 PCDH1Q08174 1060 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 CFAP157Q5JU67 520 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 TMTC4Q5T4D3 741 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 ZNF425Q6IV72 752 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 FIGLAQ6QHK4 219 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 NXPE4Q6UWF7 544 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 ADCK2Q7Z695 626 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 TMPRSS11BQ86T26 416 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 NUDCD3Q8IVD9 361 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 COL27A1Q8IZC6 1860 aaPredicted RBP14.62□□□□□ -0.07
SNIP1-202ENST00000468040 CCNYL1Q8N7R7 359 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 AGBL5Q8NDL9 886 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 CMKLR1Q99788 373 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 PAIP2Q9BPZ3 127 aaKnown RBP14.62□□□□□ -0.07
SNIP1-202ENST00000468040 PLCD4Q9BRC7 762 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 MECRQ9BV79 373 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 IPPKQ9H8X2 491 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 PELI2Q9HAT8 420 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 PDE7BQ9NP56 450 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 SH2B3Q9UQQ2 575 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 BTRCQ9Y297 605 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 DMXL1Q9Y485 3027 aa14.62□□□□□ -0.07
SNIP1-202ENST00000468040 PCM1Q15154 2024 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 IGKV1-8A0A0C4DH67 115 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 OR2A25A4D2G3 310 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 E7EQ34 232 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 H7BY64 318 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 UGDHO60701 494 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 OTCP00480 354 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 C1GALT1C1LP0DN25 315 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 JUPP14923 745 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 EZRP15311 586 aaKnown RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 EPORP19235 508 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 GRK3P35626 688 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 MLLT3P42568 568 aaPredicted RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 YBX1P67809 324 aaKnown RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 IRF8Q02556 426 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 CLCQ05315 142 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 EIF3IQ13347 325 aaKnown RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 TBCCQ15814 346 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 UNC50Q53HI1 259 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 ATG9BQ674R7 924 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 CYB5D1Q6P9G0 228 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 SLCO4C1Q6ZQN7 724 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 D2HGDHQ8N465 521 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 TBC1D19Q8N5T2 526 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 ARFGAP2Q8N6H7 521 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 RCBTB1Q8NDN9 531 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 OR4K1Q8NGD4 311 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 MGARPQ8TDB4 240 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 WDR34Q96EX3 536 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 PTCD3Q96EY7 689 aaKnown RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 LIN37Q96GY3 246 aaPredicted RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 MAGEB10Q96LZ2 347 aaPredicted RBP14.61□□□□□ -0.07
SNIP1-202ENST00000468040 PRAP1Q96NZ9 151 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 AIF1LQ9BQI0 150 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 TRMOQ9BU70 441 aa14.61□□□□□ -0.07
SNIP1-202ENST00000468040 KLHL25Q9H0H3 589 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms