RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 HMGCLL1Q8TB92 370 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 FAM45AQ8TCE6 357 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 PROKR1Q8TCW9 393 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 MCOLN3Q8TDD5 553 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 SMPDL3AQ92484 453 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 NACC2Q96BF6 587 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 LINGO1Q96FE5 620 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 RUFY1Q96T51 708 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 CORO1CQ9ULV4 474 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 SRPK3Q9UPE1 567 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 PLCL2Q9UPR0 1127 aa13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 USP9XQ93008 2570 aaPredicted RBP13.49□□□□□ -0.25
CCHCR1-211ENST00000467553 ZNF839A8K0R7 811 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 EIF3FO00303 357 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 SLC16A8O95907 504 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 PDGFAP04085 211 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 CTSBP07858 339 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 RPA3P35244 121 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 HSD17B2P37059 387 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 MAGEA4P43358 317 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 GABRA4P48169 554 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 IL2P60568 153 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 GUCY2DQ02846 1103 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 CPZQ66K79 652 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 LRRC8EQ6NSJ5 796 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 RHBDD2Q6NTF9 364 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 TLDC1Q6P9B6 456 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 FAM198BQ6UWH4 519 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 ZDHHC24Q6UX98 284 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 MCATQ8IVS2 390 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 FBXO15Q8NCQ5 510 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 MNS1Q8NEH6 495 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 OR2A1Q8NGT9 310 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 KIF18AQ8NI77 898 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 ZNF480Q8WV37 535 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 CDKL2Q92772 493 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 ZUFSPQ96AP4 578 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 FER1L6-AS2Q96M78 137 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 PSMG3-AS1Q96PY0 264 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 SMAD5Q99717 465 aaKnown RBP13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 OLFM1Q99784 485 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 SMYD2Q9NRG4 433 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 NSMCE4AQ9NXX6 385 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 EURLQ9NYK6 297 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 ADAMTS6Q9UKP5 1117 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 MAP4K5Q9Y4K4 846 aa13.48□□□□□ -0.25
CCHCR1-211ENST00000467553 TNRC6AQ8NDV7 1962 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 CTAGE15A4D2H0 777 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 CXorf49A8MYA2 514 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 TARM1B6A8C7 271 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 SORBS2O94875 1100 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 FKBP9O95302 570 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 CTAGE8P0CG41 777 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 FDXRP22570 491 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 CMPK1P30085 196 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 YBX1P67809 324 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 ARHGAP19Q14CB8 494 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 ZC3H12BQ5HYM0 836 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 FHL5Q5TD97 284 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 ZNF385CQ66K41 422 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 LCN10Q6JVE6 187 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 CTAGE6Q86UF2 777 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 SLC26A11Q86WA9 606 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 ZC3HC1Q86WB0 502 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 CTAGE4Q8IX94 777 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 MMGT1Q8N4V1 131 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 ZNF655Q8N720 491 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 OR2L3Q8NG85 312 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 DLG3Q92796 817 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 MRPS30Q9NP92 439 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 GPR83Q9NYM4 423 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 TXNDC16Q9P2K2 825 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 GPN3Q9UHW5 284 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 PDE10AQ9Y233 779 aa13.47□□□□□ -0.25
CCHCR1-211ENST00000467553 FAM95CA0A1B0GW59 222 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 CYSRT1A8MQ03 144 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 E7ENX8 843 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 H3BMH7 237 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 C8GP07360 202 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 HIST1H2AGP0C0S8 130 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 ERGP11308 486 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 HIST1H2ADP20671 130 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 ALAS2P22557 587 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 GPX6P59796 221 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 DCDP81605 110 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 TAP2Q03519 686 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 PTCHD3Q3KNS1 767 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 C1orf189Q5VU69 101 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 JMJD6Q6NYC1 403 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 CTAGE3PQ8IX95 158 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 NOA1Q8NC60 698 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 FDCSPQ8NFU4 85 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 IFT81Q8WYA0 676 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 PNPLA2Q96AD5 504 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 ALKBH8Q96BT7 664 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 HIST1H2AHQ96KK5 128 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 CCDC138Q96M89 665 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 HIST1H2AJQ99878 128 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms