RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DPCR1Q3MIW9 517 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 CMPK2Q5EBM0 449 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 HMBOX1Q6NT76 420 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 LANCL3Q6ZV70 420 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 CPEB2Q7Z5Q1 589 aaKnown RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 MAP7D3Q8IWC1 876 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 ZC3H7AQ8IWR0 971 aaKnown RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 SLC5A8Q8N695 610 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 LMNTD1Q8N9Z9 388 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 LINC01555Q8NAE3 123 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 IPMKQ8NFU5 416 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 FAM222BQ8WU58 562 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 TMEM158Q8WZ71 300 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 MMABQ96EY8 250 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 Q96MF0 132 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 NPAS2Q99743 824 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 BDH2Q9BUT1 245 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 ATG10Q9H0Y0 220 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 RTN4Q9NQC3 1192 aaKnown RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 C19orf25Q9UFG5 118 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 CIDEBQ9UHD4 219 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 TLN2Q9Y4G6 2542 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 LOC105369274A0A096LPK9 316 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 LOC102723532A0A0G2JNH3 316 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 C2orf81A6NN90 581 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 CRLF1O75462 422 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 PDE9AO76083 593 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 GSTM1P09488 218 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 GZMAP12544 262 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 CD53P19397 219 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 NFKB1P19838 968 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 ACADLP28330 430 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 EFNA3P52797 238 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 TAS2R50P59544 299 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 GSTM4Q03013 218 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 CBLBQ13191 982 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 SYT16Q17RD7 645 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 TEX44Q53QW1 395 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 FIGNQ5HY92 759 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 EMC4Q5J8M3 183 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 IRF2BP2Q7Z5L9 587 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 LIX1LQ8IVB5 337 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 OR4N4Q8N0Y3 316 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 AMER3Q8N944 861 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-203ENST00000467533 ELMO1Q92556 727 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 TMEM125Q96AQ2 219 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 FAF2Q96CS3 445 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 MVB12AQ96EY5 273 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 MRGPRX2Q96LB1 330 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 IL17FQ96PD4 163 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 FSD1LQ9BXM9 530 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 TGIF2Q9GZN2 237 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 PNPLA3Q9NST1 481 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 ZDHHC3Q9NYG2 299 aa9.65□□□□□ -0.86
HDAC3-203ENST00000467533 ZANQ9Y493 2812 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 A0A0G2JNJ9 132 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 FIGNL2A6NMB9 653 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 AGAP14A8MT82 685 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 TARM1B6A8C7 271 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 NPIPA2E9PIF3 369 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 NPIPA3F8WFD2 350 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 NRP2O60462 931 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-203ENST00000467533 EPOP01588 193 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 CD9P21926 228 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 TACR1P25103 407 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 PTPN3P26045 913 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 ACVR2AP27037 513 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 PRKCIP41743 596 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 XIAPP98170 497 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 PDK1Q15118 436 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 TAF1AQ15573 450 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-203ENST00000467533 EXT1Q16394 746 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 MINDY4Q4G0A6 757 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 ZNF468Q5VIY5 522 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-203ENST00000467533 ZNF585AQ6P3V2 769 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 NPNTQ6UXI9 565 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 B3GNT6Q6ZMB0 384 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 RNF44Q7L0R7 432 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 SNX20Q7Z614 316 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 CLDN19Q8N6F1 224 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 PLD5Q8N7P1 536 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 OR5M9Q8NGP3 310 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 OR13C4Q8NGS5 318 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 ZUFSPQ96AP4 578 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 TTYH2Q9BSA4 534 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 MENTQ9BUN1 341 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 FICDQ9BVA6 458 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 VN1R1Q9GZP7 353 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 PLEKHF2Q9H8W4 249 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 Q9UFV3 132 aa9.64□□□□□ -0.87
HDAC3-203ENST00000467533 KLF13Q9Y2Y9 288 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-203ENST00000467533 IGLV3-16A0A075B6K0 115 aa9.63□□□□□ -0.87
HDAC3-203ENST00000467533 A0A0A6YYC8 382 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-203ENST00000467533 TRIM64A6NGJ6 449 aa9.63□□□□□ -0.87
HDAC3-203ENST00000467533 TRIM64BA6NI03 449 aa9.63□□□□□ -0.87
HDAC3-203ENST00000467533 KLRC4-KLRK1H3BQV0 150 aa9.63□□□□□ -0.87
HDAC3-203ENST00000467533 I3L1I5 382 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-203ENST00000467533 NDC80O14777 642 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms