RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PTCHD3Q3KNS1 767 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 TECRLQ5HYJ1 363 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 CAPN13Q6MZZ7 669 aaPredicted RBP10.6□□□□□ -0.71
MSH5-212ENST00000467319 ZNF517Q6ZMY9 492 aaPredicted RBP10.6□□□□□ -0.71
MSH5-212ENST00000467319 FRA10AC1Q70Z53 315 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 GPSM1Q86YR5 675 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 RHEBL1Q8TAI7 183 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 UBTD2Q8WUN7 234 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 UBLCP1Q8WVY7 318 aaPredicted RBP10.6□□□□□ -0.71
MSH5-212ENST00000467319 NXNL1Q96CM4 212 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 MED8Q96G25 268 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 LRFN5Q96NI6 719 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 TMEM79Q9BSE2 394 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 PARD6BQ9BYG5 372 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 ATG10Q9H0Y0 220 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 NMRAL1Q9HBL8 299 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 MRPS30Q9NP92 439 aaKnown RBP10.6□□□□□ -0.71
MSH5-212ENST00000467319 NUDT4Q9NZJ9 180 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 TLK1Q9UKI8 766 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 PLCL2Q9UPR0 1127 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 FER1L5A0AVI2 2057 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 NBEAQ8NFP9 2946 aa10.6□□□□□ -0.71
MSH5-212ENST00000467319 ZFYVE26Q68DK2 2539 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 ANKRD12Q6UB98 2062 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 TEX51A0A1B0GUA7 166 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 FITM1A5D6W6 292 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 TERTO14746 1132 aaKnown RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 TAPBPO15533 448 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 ZSCAN9O15535 394 aaPredicted RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 RAD1O60671 282 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 SCRG1O75711 98 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 IPO13O94829 963 aaKnown RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 KIAA0754O94854 1291 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 TUBBP07437 444 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 COL6A2P12110 1019 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 NPPBP16860 134 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 HRH2P25021 359 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 STAT5AP42229 794 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 TSTA3Q13630 321 aaPredicted RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 TGIF1Q15583 401 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 ZNF385CQ66K41 422 aaPredicted RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 C17orf64Q86WR6 236 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 MCATQ8IVS2 390 aaKnown RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 NLGN4XQ8N0W4 816 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 PLD6Q8N2A8 252 aaKnown RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 TCAIMQ8N3R3 496 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 ESX1Q8N693 406 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 SLC38A9Q8NBW4 561 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 ABHD11Q8NFV4 315 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 NLGN4YQ8NFZ3 816 aaPredicted RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 STAG3L4Q8TBR4 150 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 NKD1Q969G9 470 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 PYCR2Q96C36 320 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 ZFYVE21Q9BQ24 234 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 HAUS8Q9BT25 410 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 PTBP2Q9UKA9 531 aaKnown RBP10.59□□□□□ -0.71
MSH5-212ENST00000467319 RNF112Q9ULX5 631 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 MGAQ8IWI9 3026 aa10.59□□□□□ -0.71
MSH5-212ENST00000467319 SPTBP11277 2137 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 IQANK1A0A1B0GTG1 560 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 HAT1O14929 419 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 RRP8O43159 456 aaKnown RBP10.58□□□□□ -0.72
MSH5-212ENST00000467319 KLK8O60259 260 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 OR2B3O76000 313 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 CDH1P12830 882 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 GLRBP48167 497 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 CSNK1G2P78368 415 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 GPS2Q13227 327 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 ACAP2Q15057 778 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 TSNAXIP1Q2TAA8 658 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 PRTGQ2VWP7 1150 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 C18orf21Q32NC0 220 aaPredicted RBP10.58□□□□□ -0.72
MSH5-212ENST00000467319 ZC3H12BQ5HYM0 836 aaKnown RBP10.58□□□□□ -0.72
MSH5-212ENST00000467319 LGSNQ5TDP6 509 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 THEMIS2Q5TEJ8 643 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 PRAMEF17Q5VTA0 474 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 SULT1C3Q6IMI6 304 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 FRMPD2BQ6IN97 320 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 RHBDD2Q6NTF9 364 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 SH2D5Q6ZV89 423 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 LCA5Q86VQ0 697 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 THOC6Q86W42 341 aaKnown RBP10.58□□□□□ -0.72
MSH5-212ENST00000467319 CACNA2D3Q8IZS8 1091 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 ARHGEF39Q8N4T4 335 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 OR4K1Q8NGD4 311 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 ACMSDQ8TDX5 336 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 EPS8L3Q8TE67 593 aaKnown RBP10.58□□□□□ -0.72
MSH5-212ENST00000467319 NEIL2Q969S2 332 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 NAF1Q96HR8 494 aaKnown RBP10.58□□□□□ -0.72
MSH5-212ENST00000467319 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 OR2A5Q96R48 311 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 EGFL8Q99944 293 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 SARGQ9BW04 601 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 VPS11Q9H270 941 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 ACTR5Q9H9F9 607 aaPredicted RBP10.58□□□□□ -0.72
MSH5-212ENST00000467319 PCMTD2Q9NV79 361 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 TMEM184CQ9NVA4 438 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms