RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 PRDM1O75626 825 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 BCL10O95999 233 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 ATP1B1P05026 303 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 CENPBP07199 599 aaPredicted RBP2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 CAPGP40121 348 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 DNA2P51530 1060 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 ALDH3A2P51648 485 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 FCHO2Q0JRZ9 810 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 TMEM132DQ14C87 1099 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 PCLAFQ15004 111 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 FAM182AQ5T1J6 154 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 LCLAT1Q6UWP7 414 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 NUP54Q7Z3B4 507 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 ZER1Q7Z7L7 766 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 PCGF5Q86SE9 256 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 KCNMB4Q86W47 210 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 FGFRL1Q8N441 504 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 Q8N7P7 452 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 OR5T2Q8NGG2 359 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 ZNF622Q969S3 477 aaKnown RBP eCLIP2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 ATF6BQ99941 703 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 MTMR12Q9C0I1 747 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 NYXQ9GZU5 481 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 SLITRK2Q9H156 845 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 ZHX3Q9H4I2 956 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 MYNNQ9NPC7 610 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 CHST11Q9NPF2 352 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 DPP3Q9NY33 737 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 CRNNQ9UBG3 495 aaPredicted RBP2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 WDR83OSQ9Y284 106 aa2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 PTRH2Q9Y3E5 179 aaKnown RBP2.22□□□□□ -2.05
GTF3C3-209ENST00000466862 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 A0A1W2PQ09 198 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 A0A1W2PQ72 361 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 GALR3O60755 368 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 POP4O95707 220 aaKnown RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 BAG3O95817 575 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 HPP00738 406 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 BDNFP23560 247 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 EDNRAP25101 427 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 OXTRP30559 389 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 NRIP1P48552 1158 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 CDH13P55290 713 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 CLDN15P56746 228 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 GEMIN4P57678 1058 aaKnown RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 ARF3P61204 181 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 PSMC6P62333 389 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 ARF1P84077 181 aaKnown RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 KLC1Q07866 573 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 ZNF177Q13360 481 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 TRIM29Q14134 588 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 C3AR1Q16581 482 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 PHKG1Q16816 387 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 MS4A18Q3C1V0 323 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 PRR30Q53SZ7 412 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 FAM180BQ6P0A1 224 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 BAIAP2L2Q6UXY1 529 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 C3P1Q6ZMU1 363 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 LINC00346Q8IVM7 164 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 NME8Q8N427 588 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 C9orf43Q8TAL5 461 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 SYN2Q92777 582 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 SLAMF9Q96A28 289 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 RFT1Q96AA3 541 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 MPP4Q96JB8 637 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 TMX4Q9H1E5 349 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 OSGEPL1Q9H4B0 414 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 SMARCAD1Q9H4L7 1026 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 SLC35C2Q9NQQ7 365 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 TNFRSF19Q9NS68 423 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 SWAP70Q9UH65 585 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 FBXO2Q9UK22 296 aaPredicted RBP2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 PADI2Q9Y2J8 665 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 R4GN57 208 aa2.21□□□□□ -2.06
GTF3C3-209ENST00000466862 A0A087WWV3 80 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 A0A1W2PPK0 400 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 A0A1W2PPM1 405 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 CCL24O00175 119 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 MEIS2O14770 477 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 ECE2O60344 883 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 GJB3O75712 270 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 BAIAP3O94812 1187 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 GJA1P17302 382 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 CAPN3P20807 821 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 DNASE1P24855 282 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 VAMP7P51809 220 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 MAPK12P53778 367 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 MYL7Q01449 175 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 MC1RQ01726 317 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 POU5F1Q01860 360 aaKnown RBP2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 CREB5Q02930 508 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 SIM2Q14190 667 aaPredicted RBP2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 FAM189A2Q15884 450 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 CCDC30Q5VVM6 783 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 RNLSQ5VYX0 342 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 FAM166AQ6J272 317 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 VITQ6UXI7 678 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 CDHR3Q6ZTQ4 885 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 Q6ZVH6 145 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 RAPH1Q70E73 1250 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms