RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SMPDL3AQ92484 453 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 DLG3Q92796 817 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 VPS39Q96JC1 886 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 SLC45A3Q96JT2 553 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 DPH7Q9BTV6 452 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 SLC12A9Q9BXP2 914 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 ATG10Q9H0Y0 220 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 CAB39LQ9H9S4 337 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 TXLNGQ9NUQ3 528 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 SCN3AQ9NY46 2000 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 EURLQ9NYK6 297 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 MOCS1Q9NZB8 636 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 CORO1CQ9ULV4 474 aaPredicted RBP9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 NFU1Q9UMS0 254 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 PLCL2Q9UPR0 1127 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 PDE10AQ9Y233 779 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 PCDHB3Q9Y5E6 796 aa9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 TNRC6AQ8NDV7 1962 aaKnown RBP9.35□□□□□ -0.91
RTFDC1-205ENST00000466260 SCN2AQ99250 2005 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ZNF839A8K0R7 811 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 E7ENX8 843 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ERVH48-1M5A8F1 160 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 AGPSO00116 658 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 MEN1O00255 615 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ZSCAN9O15535 394 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 PHGDHO43175 533 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 PRICKLE3O43900 615 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 CTSVO60911 334 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 FAM155BO75949 473 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 STATHP02808 62 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 C8GP07360 202 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 HIST1H2AGP0C0S8 130 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ERGP11308 486 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ZNF37AP17032 561 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 HIST1H2ADP20671 130 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ALAS2P22557 587 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 SKIV2L2P42285 1042 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 RPS15P62841 145 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 NFKB2Q00653 900 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 TAP2Q03519 686 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 PHKG1Q16816 387 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 KBTBD12Q3ZCT8 623 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 UBAP2Q5T6F2 1119 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 PRAMEF13Q5VWM6 474 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 MLIPQ5VWP3 458 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ICE2Q659A1 982 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 FRMPD2BQ6IN97 320 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 TMEM207Q6UWW9 146 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 TTLL10Q6ZVT0 673 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 FRA10AC1Q70Z53 315 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 GALNT7Q86SF2 657 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 PLD3Q8IV08 490 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 MCATQ8IVS2 390 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 CEP97Q8IW35 865 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 DNAJC22Q8N4W6 341 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ENDOVQ8N8Q3 282 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 TTC29Q8NA56 475 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 HMGCLL1Q8TB92 370 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 MCOLN3Q8TDD5 553 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 TTC9Q92623 222 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 HIST1H2AHQ96KK5 128 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ATP6V1G3Q96LB4 118 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 FMO2Q99518 471 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 HIST1H2AJQ99878 128 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 SELENOSQ9BQE4 189 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 H2AFJQ9BTM1 129 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 NDC1Q9BTX1 674 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 TWSG1Q9GZX9 223 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 RHOJQ9H4E5 214 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 ACTL8Q9H568 366 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 LRRC4CQ9HCJ2 640 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 GPAMQ9HCL2 828 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 CCDC177Q9NQR7 707 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 CUEDC1Q9NWM3 386 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 NSMCE4AQ9NXX6 385 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 STOX2Q9P2F5 926 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 KLHL42Q9P2K6 505 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 KCND3Q9UK17 655 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 IKZF3Q9UKT9 509 aa9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 MTO1Q9Y2Z2 717 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-205ENST00000466260 LOC105369274A0A096LPK9 316 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 LOC102723532A0A0G2JNH3 316 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 NCF1BA6NI72 391 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 NCF1CA8MVU1 366 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 C9J4A7 227 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 GFYI3L273 518 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 EIF3FO00303 357 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 CDC7O00311 574 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 ATXN7O15265 892 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 CCNDBP1O95273 360 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 TSPAN12O95859 305 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 FURINP09958 794 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 FAM87AP0C7U9 286 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 NCF1P14598 390 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 AGXTP21549 392 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 STX2P32856 288 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 RORAP35398 523 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms