RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CSNK1DP48730 415 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 VEGFBP49765 207 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 ARHGDIAP52565 204 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 ARHGEF6Q15052 776 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 FXNQ16595 210 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 IER5LQ5T953 404 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 ATG9BQ674R7 924 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 TRIM73Q86UV7 250 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 CHDHQ8NE62 594 aaPredicted RBP15.85■□□□□ 0.13
SLX4-202ENST00000466154 OR5K1Q8NHB7 308 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 BTBD3Q9Y2F9 522 aa15.85■□□□□ 0.13
SLX4-202ENST00000466154 SAMHD1Q9Y3Z3 626 aaKnown RBP15.85■□□□□ 0.13
SLX4-202ENST00000466154 METAP1P53582 386 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.84■□□□□ 0.13
SLX4-202ENST00000466154 TMEM220Q6QAJ8 160 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 AGTRAPQ6RW13 159 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 TRAPPC5Q8IUR0 188 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 ZCCHC7Q8N3Z6 543 aaKnown RBP15.84■□□□□ 0.13
SLX4-202ENST00000466154 OR4K1Q8NGD4 311 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 VWCEQ96DN2 955 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 RHNO1Q9BSD3 238 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 ACAT2Q9BWD1 397 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 PRKAB1Q9Y478 270 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 INMTO95050 263 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 ETHE1O95571 254 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 ADH1AP07327 375 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 ANXA4P09525 319 aaPredicted RBP15.84■□□□□ 0.13
SLX4-202ENST00000466154 ELFN1P0C7U0 828 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 RAD23AP54725 363 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 EMP3P54852 163 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 PPP2R2BQ00005 443 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 UGT8Q16880 541 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 MPP7Q5T2T1 576 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 METTL3Q86U44 580 aaKnown RBP15.84■□□□□ 0.13
SLX4-202ENST00000466154 SPARTQ8N0X7 666 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 IRF7Q92985 503 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 UBE2FQ969M7 185 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 ECHDC3Q96DC8 303 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 HEPHQ9BQS7 1158 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 TDP1Q9NUW8 608 aa15.84■□□□□ 0.13
SLX4-202ENST00000466154 PNMA8BQ9ULN7 279 aaPredicted RBP15.84■□□□□ 0.13
SLX4-202ENST00000466154 MGAT4DA6NG13 374 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 FAM220BPB1ANY3 271 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 BCL10O95999 233 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 PSMD7P51665 324 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 ATP1A4Q13733 1029 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 FAM217AQ8IXS0 508 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 OR52J3Q8NH60 311 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 ZNF689Q96CS4 500 aaPredicted RBP15.83■□□□□ 0.13
SLX4-202ENST00000466154 AP2M1Q96CW1 435 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 LYSMD1Q96S90 227 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 ARMC7Q9H6L4 198 aa15.83■□□□□ 0.13
SLX4-202ENST00000466154 XIRP2A4UGR9 3374 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 NUAK1O60285 661 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 ABCB7O75027 752 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 MYO1DO94832 1006 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 EPHA2P29317 976 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 CRATP43155 626 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 HNMTP50135 292 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 PLA2G16P53816 162 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 ERVFC1P60507 584 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 ABHD18Q0P651 414 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 SMN1Q16637 294 aaKnown RBP15.83■□□□□ 0.12
SLX4-202ENST00000466154 CCDC149Q6ZUS6 474 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 DCP2Q8IU60 420 aaKnown RBP15.83■□□□□ 0.12
SLX4-202ENST00000466154 CFAP206Q8IYR0 622 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 YY2O15391 372 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 ANGPTL1O95841 491 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 HLA-EP13747 358 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 MAP2K4P45985 399 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 PHEXP78562 749 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 VLDLRP98155 873 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 CRTC3Q6UUV7 619 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 SVOPLQ8N434 492 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 RASGEF1AQ8N9B8 481 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 SPPL2AQ8TCT8 520 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 ITFG2Q969R8 447 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 VOPP1Q96AW1 172 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 REXO5Q96IC2 774 aaKnown RBP15.83■□□□□ 0.12
SLX4-202ENST00000466154 HSH2DQ96JZ2 352 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 MCCC1Q96RQ3 725 aaPredicted RBP15.83■□□□□ 0.12
SLX4-202ENST00000466154 SPHK2Q9NRA0 654 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.83■□□□□ 0.12
SLX4-202ENST00000466154 TMEM45AQ9NWC5 275 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 FBXO10Q9UK96 956 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 ERVK-11Q9UQG0 969 aa15.83■□□□□ 0.12
SLX4-202ENST00000466154 DNAH14Q0VDD8 3507 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 KCNE1BA0A087WTH5 132 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 AGAP14A8MT82 685 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 CYP2A6P11509 494 aaPredicted RBP15.82■□□□□ 0.12
SLX4-202ENST00000466154 JUPP14923 745 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 PRPS1L1P21108 318 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 SLC6A12P48065 614 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 NFATC3Q12968 1075 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 DUOXA1Q1HG43 343 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 GALNT18Q6P9A2 607 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 ANKRD33Q7Z3H0 272 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 TRMT11Q7Z4G4 463 aaKnown RBP15.82■□□□□ 0.12
SLX4-202ENST00000466154 ADIPOR2Q86V24 386 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 CYP4Z1Q86W10 505 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms