RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 FBXO42Q6P3S6 717 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 C19orf48Q6RUI8 117 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 C6orf15Q6UXA7 325 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 ADCK2Q7Z695 626 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 ISCA2Q86U28 154 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 VASH2Q86V25 355 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 GPR135Q8IZ08 494 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 CENPLQ8N0S6 344 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 NLGN4XQ8N0W4 816 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 IL22RA1Q8N6P7 574 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 NLGN4YQ8NFZ3 816 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-202ENST00000465601 EXT2Q93063 718 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 PRAP1Q96NZ9 151 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 CCDC77Q9BR77 488 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 PLCD4Q9BRC7 762 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 SGPP1Q9BX95 441 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 PARD6BQ9BYG5 372 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 IRAK4Q9NWZ3 460 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 RNF112Q9ULX5 631 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 SNX7Q9UNH6 387 aa11.88□□□□□ -0.51
CHPF2-202ENST00000465601 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 E7EQ34 232 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 H3BMH7 237 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 ZNF749O43361 778 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 KRT37O76014 449 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 SHBGP04278 402 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 CCND1P24385 295 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 CNTFP26441 200 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 HSD17B3P37058 310 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 SLC26A3P40879 764 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 MAGEA12P43365 314 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 ATP1A2P50993 1020 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 VSX2P58304 361 aaPredicted RBP11.87□□□□□ -0.51
CHPF2-202ENST00000465601 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 FAM83EQ2M2I3 478 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 PTCHD3Q3KNS1 767 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 MANEAQ5SRI9 462 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 LGSNQ5TDP6 509 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 ZNF425Q6IV72 752 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 LCTLQ6UWM7 567 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 CCDC91Q7Z6B0 441 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 PAQR7Q86WK9 346 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 C17orf64Q86WR6 236 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 PLD6Q8N2A8 252 aaKnown RBP11.87□□□□□ -0.51
CHPF2-202ENST00000465601 ZNF655Q8N720 491 aaPredicted RBP11.87□□□□□ -0.51
CHPF2-202ENST00000465601 SLC38A9Q8NBW4 561 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 STAG3L4Q8TBR4 150 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 ISL2Q96A47 359 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 RHBDF1Q96CC6 855 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 OR4K3Q96R72 315 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 SELENOSQ9BQE4 189 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 SLC7A5P2Q9GIP4 190 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 AKIRIN1Q9H9L7 192 aaPredicted RBP11.87□□□□□ -0.51
CHPF2-202ENST00000465601 STARD5Q9NSY2 213 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 CD274Q9NZQ7 290 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 ANKMY1Q9P2S6 941 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 PCDHB3Q9Y5E6 796 aa11.87□□□□□ -0.51
CHPF2-202ENST00000465601 NBEAQ8NFP9 2946 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 LOC105369274A0A096LPK9 316 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 LOC102723532A0A0G2JNH3 316 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 LOC101059948A0A1B0GTJ6 334 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 TAPBPO15533 448 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 EFSO43281 561 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 CPNE3O75131 537 aaKnown RBP11.86□□□□□ -0.51
CHPF2-202ENST00000465601 KLHL2O95198 593 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 CCNYL3P0C7X3 344 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 CDH1P12830 882 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 GDF5P43026 501 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 GLRBP48167 497 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 HNMTP50135 292 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 GPS2Q13227 327 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 MAP7Q14244 749 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 FBXO48Q5FWF7 155 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 WASHC2DQ5SRD0 308 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 BROXQ5VW32 411 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 FRMPD2BQ6IN97 320 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 TLDC1Q6P9B6 456 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 THOC6Q86W42 341 aaKnown RBP11.86□□□□□ -0.51
CHPF2-202ENST00000465601 PLD3Q8IV08 490 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 OR4N4Q8N0Y3 316 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 ESX1Q8N693 406 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
CHPF2-202ENST00000465601 ESAMQ96AP7 390 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 CLIP3Q96DZ5 547 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 GPR78Q96P69 363 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 CCNL2Q96S94 520 aaPredicted RBP11.86□□□□□ -0.51
CHPF2-202ENST00000465601 ZFYVE21Q9BQ24 234 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 HAUS8Q9BT25 410 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
CHPF2-202ENST00000465601 TMEM184CQ9NVA4 438 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 ZNF358Q9NW07 568 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 WWOXQ9NZC7 414 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 PSMC3IPQ9P2W1 217 aaPredicted RBP11.86□□□□□ -0.51
CHPF2-202ENST00000465601 FETUBQ9UGM5 382 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 TBK1Q9UHD2 729 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 PADI1Q9ULC6 663 aa11.86□□□□□ -0.51
CHPF2-202ENST00000465601 SLC22A14Q9Y267 594 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms