RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TFEBP19484 476 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 HSD17B3P37058 310 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 SLC6A12P48065 614 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 ZC3H12BQ5HYM0 836 aaKnown RBP19.49■□□□□ 0.71
SKA3-205ENST00000465471 THEMIS2Q5TEJ8 643 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 PRAMEF17Q5VTA0 474 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 TIFABQ6ZNK6 161 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 LRRC69Q6ZNQ3 347 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 GPSM1Q86YR5 675 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 TMEM126BQ8IUX1 230 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 MCATQ8IVS2 390 aaKnown RBP19.49■□□□□ 0.71
SKA3-205ENST00000465471 CNPY4Q8N129 248 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 SLC38A9Q8NBW4 561 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 PDPRQ8NCN5 879 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 RHEBL1Q8TAI7 183 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 UBLCP1Q8WVY7 318 aaPredicted RBP19.49■□□□□ 0.71
SKA3-205ENST00000465471 CAVIN3Q969G5 261 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 PYCR2Q96C36 320 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 MTBPQ96DY7 904 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 LRFN5Q96NI6 719 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 PARD6BQ9BYG5 372 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 ALG9Q9H6U8 611 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 PSMC3IPQ9P2W1 217 aaPredicted RBP19.49■□□□□ 0.71
SKA3-205ENST00000465471 SNX7Q9UNH6 387 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 PTPRQQ9UMZ3 2332 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 E7EQ34 232 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 KLK10O43240 276 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 KERAO60938 352 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 OR2B3O76000 313 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 EZRP15311 586 aaKnown RBP19.48■□□□□ 0.71
SKA3-205ENST00000465471 HRH2P25021 359 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 ITPKBP27987 946 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 GGT5P36269 586 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 FAM83EQ2M2I3 478 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 PTCHD3Q3KNS1 767 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 FBXO42Q6P3S6 717 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 C6orf15Q6UXA7 325 aaPredicted RBP19.48■□□□□ 0.71
SKA3-205ENST00000465471 ZNF517Q6ZMY9 492 aaPredicted RBP19.48■□□□□ 0.71
SKA3-205ENST00000465471 CACNA2D3Q8IZS8 1091 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 ESX1Q8N693 406 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 GALNT6Q8NCL4 622 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 STAG3L4Q8TBR4 150 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 MZB1Q8WU39 189 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 ZFYVE21Q9BQ24 234 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 TMEM79Q9BSE2 394 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 HAUS8Q9BT25 410 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 SPRTNQ9H040 489 aaPredicted RBP19.48■□□□□ 0.71
SKA3-205ENST00000465471 SYNPO2LQ9H987 977 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 PPCSQ9HAB8 311 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 ABCF3Q9NUQ8 709 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 FER1L5A0AVI2 2057 aa19.48■□□□□ 0.71
SKA3-205ENST00000465471 MDC1Q14676 2089 aaKnown RBP19.48■□□□□ 0.71
SKA3-205ENST00000465471 TAPBPO15533 448 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 RFPL1O75677 317 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 MT-ND3P03897 115 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 NTRK1P04629 796 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 RORAP35398 523 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 STAT5AP42229 794 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 ATP1A2P50993 1020 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 ABHD18Q0P651 414 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 ACAP2Q15057 778 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 RASA2Q15283 850 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 LGSNQ5TDP6 509 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 FRMPD2BQ6IN97 320 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 C17orf64Q86WR6 236 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 TDRPQ86YL5 185 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 GPR135Q8IZ08 494 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 PLD6Q8N2A8 252 aaKnown RBP19.47■□□□□ 0.71
SKA3-205ENST00000465471 TCAIMQ8N3R3 496 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 ABHD11Q8NFV4 315 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 N4BP2L2Q92802 583 aaPredicted RBP19.47■□□□□ 0.71
SKA3-205ENST00000465471 RNF31Q96EP0 1072 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 EGFL8Q99944 293 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 CCDC77Q9BR77 488 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 TMEM184CQ9NVA4 438 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 NUDT4Q9NZJ9 180 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 PTBP2Q9UKA9 531 aaKnown RBP19.47■□□□□ 0.71
SKA3-205ENST00000465471 RNF112Q9ULX5 631 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 AP1M2Q9Y6Q5 423 aa19.47■□□□□ 0.71
SKA3-205ENST00000465471 FITM1A5D6W6 292 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 NCF1BA6NI72 391 aaPredicted RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 NCF1CA8MVU1 366 aaPredicted RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 TERTO14746 1132 aaKnown RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 HAT1O14929 419 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 ZSCAN9O15535 394 aaPredicted RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 ZNF749O43361 778 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 SRPX2O60687 465 aaPredicted RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 NUDT17P0C025 328 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 COL6A2P12110 1019 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 MTHFD2P13995 350 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 NCF1P14598 390 aaPredicted RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 GPS2Q13227 327 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 C18orf21Q32NC0 220 aaPredicted RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 TCTE1Q5JU00 501 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 ZNF385CQ66K41 422 aaPredicted RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 SULT1C3Q6IMI6 304 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 TLDC1Q6P9B6 456 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 THOC6Q86W42 341 aaKnown RBP19.46■□□□□ 0.71
SKA3-205ENST00000465471 OR2A5Q96R48 311 aa19.46■□□□□ 0.71
SKA3-205ENST00000465471 SELENOSQ9BQE4 189 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms