RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 EPN3Q9H201 632 aa12.91□□□□□ -0.34
ATF3-208ENST00000465155 RABEP2Q9H5N1 569 aa12.91□□□□□ -0.34
ATF3-208ENST00000465155 MRPS30Q9NP92 439 aaKnown RBP12.91□□□□□ -0.34
ATF3-208ENST00000465155 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
ATF3-208ENST00000465155 HAO1Q9UJM8 370 aa12.91□□□□□ -0.34
ATF3-208ENST00000465155 TRAF6Q9Y4K3 522 aa12.91□□□□□ -0.34
ATF3-208ENST00000465155 COL5A1P20908 1838 aaPredicted RBP12.9□□□□□ -0.34
ATF3-208ENST00000465155 IGHV1OR21-1A0A087WYE8 117 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 MATN2O00339 956 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 AZIN1O14977 448 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 UGDHO60701 494 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 WFS1O76024 890 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 FGF4P08620 206 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 C1GALT1C1LP0DN25 315 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 CKMT1AP12532 417 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 CD59P13987 128 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 PNLIPP16233 465 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 CD22P20273 847 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 VARSP26640 1264 aaKnown RBP12.9□□□□□ -0.34
ATF3-208ENST00000465155 PPP1CAP62136 330 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 CPSF6Q16630 551 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATF3-208ENST00000465155 PERM1Q5SV97 790 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 NKAIN2Q5VXU1 208 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 KIAA1614Q5VZ46 1190 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 LIPJQ5W064 366 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 ATG9BQ674R7 924 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 SPESP1Q6UW49 350 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 NXPE4Q6UWF7 544 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 CPLX4Q7Z7G2 160 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 L3MBTL4Q8NA19 623 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 NAT6Q93015 286 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
ATF3-208ENST00000465155 THOC1Q96FV9 657 aaKnown RBP12.9□□□□□ -0.34
ATF3-208ENST00000465155 PRR11Q96HE9 360 aaPredicted RBP12.9□□□□□ -0.34
ATF3-208ENST00000465155 EHD1Q9H4M9 534 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 TRPS1Q9UHF7 1281 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 TIMM22Q9Y584 194 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 HEATR5BQ9P2D3 2071 aa12.9□□□□□ -0.34
ATF3-208ENST00000465155 MUC6Q6W4X9 2439 aa12.9□□□□□ -0.35
ATF3-208ENST00000465155 IGKV1-8A0A0C4DH67 115 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 C4orf47A7E2U8 309 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 PROB1E7EW31 1015 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 H7BY64 318 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 FFAR3O14843 346 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 GPR42O15529 346 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 B4GAT1O43505 415 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 SH3BP5O60239 455 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 LDOC1O95751 146 aaPredicted RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 ENO1P06733 434 aaKnown RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 CAPN1P07384 714 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 SERPINB3P29508 390 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 DUSP3P51452 185 aaPredicted RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 GPLD1P80108 840 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 ABATP80404 500 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 MEF2AQ02078 507 aaPredicted RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 SF3A3Q12874 501 aaKnown RBP eCLIP12.89□□□□□ -0.35
ATF3-208ENST00000465155 TBCCQ15814 346 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 AMZ1Q400G9 498 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 CGB2Q6NT52 195 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 IRGCQ6NXR0 463 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 EFL1Q7Z2Z2 1120 aaKnown RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 ADCK2Q7Z695 626 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 SPRED1Q7Z699 444 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 TRIM73Q86UV7 250 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 WDR75Q8IWA0 830 aaKnown RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 CLYBLQ8N0X4 340 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 IFI44Q8TCB0 444 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 METTL6Q8TCB7 284 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 NCSTNQ92542 709 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 CNDP2Q96KP4 475 aaKnown RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 PRAP1Q96NZ9 151 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 PHOX2BQ99453 314 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 DPH7Q9BTV6 452 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 ZMYND15Q9H091 742 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
ATF3-208ENST00000465155 EPB41L1Q9H4G0 881 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 PELI2Q9HAT8 420 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 NPHS2Q9NP85 383 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 SLC6A20Q9NP91 592 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 EVA1BQ9NVM1 165 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 POMT2Q9UKY4 750 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 KLHL20Q9Y2M5 609 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 WDR87Q6ZQQ6 2873 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 RP1P56715 2156 aa12.89□□□□□ -0.35
ATF3-208ENST00000465155 SRRM3A6NNA2 597 aaPredicted RBP12.88□□□□□ -0.35
ATF3-208ENST00000465155 CAPN5O15484 640 aaPredicted RBP12.88□□□□□ -0.35
ATF3-208ENST00000465155 ZW10O43264 779 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 DUX1O43812 170 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 GDF9O60383 454 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 UROSP10746 265 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 JUPP14923 745 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 DRD4P21917 467 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 HMOX2P30519 316 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 CASP2P42575 452 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 CCR8P51685 355 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 E2F2Q14209 437 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 SLBPQ14493 270 aaKnown RBP eCLIP12.88□□□□□ -0.35
ATF3-208ENST00000465155 SLC5A12Q1EHB4 618 aa12.88□□□□□ -0.35
ATF3-208ENST00000465155 GGTA1PQ4G0N0 100 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms