RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 H3BMH7 237 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 H7BY64 318 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 CTSVO60911 334 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 CPNE3O75131 537 aaKnown RBP13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 KLHL2O95198 593 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 MT-ND3P03897 115 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 CCNYL3P0C7X3 344 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 NCF1P14598 390 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 TFEBP19484 476 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 HRH2P25021 359 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 MAGEA12P43365 314 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 KCNC1P48547 511 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 IRF9Q00978 393 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 TLE3Q04726 772 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 CDKL4Q5MAI5 379 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 BROXQ5VW32 411 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 TLDC1Q6P9B6 456 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 ADCK2Q7Z695 626 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 PAQR7Q86WK9 346 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 C17orf64Q86WR6 236 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 CENPLQ8N0S6 344 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 ESX1Q8N693 406 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 KCTD4Q8WVF5 259 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 HNRNPLLQ8WVV9 542 aaKnown RBP13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 RHBDF1Q96CC6 855 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 MTBPQ96DY7 904 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 PRAP1Q96NZ9 151 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 HAUS8Q9BT25 410 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 SLC7A5P2Q9GIP4 190 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 VPS11Q9H270 941 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 ALG9Q9H6U8 611 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 TMEM184CQ9NVA4 438 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 CUEDC1Q9NWM3 386 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 IRAK4Q9NWZ3 460 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 SSUH2Q9Y2M2 353 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 CFAP47Q6ZTR5 3102 aa13.92□□□□□ -0.18
SQSTM1-205ENST00000464493 A0A0J9YVX5 310 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 IQANK1A0A1B0GTG1 560 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 CCDC189A1A4V9 331 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 ZNF749O43361 778 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 NRP2O60462 931 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 SRPX2O60687 465 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 SHBGP04278 402 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 CTSBP07858 339 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 HBQ1P09105 142 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 HSD17B3P37058 310 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 RELAQ04206 551 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 ABHD18Q0P651 414 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 ACAP2Q15057 778 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 PTCHD3Q3KNS1 767 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 TCTE1Q5JU00 501 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 MANEAQ5SRI9 462 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 SULT1C3Q6IMI6 304 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 KLC3Q6P597 504 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 EMBQ6PCB8 327 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 TIFABQ6ZNK6 161 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 RNF44Q7L0R7 432 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 THOC6Q86W42 341 aaKnown RBP13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 CNPY4Q8N129 248 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 TCAIMQ8N3R3 496 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 SLC38A9Q8NBW4 561 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 RHEBL1Q8TAI7 183 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 AENQ8WTP8 325 aaKnown RBP13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 OR4K3Q96R72 315 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 CCNL2Q96S94 520 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 ZFYVE21Q9BQ24 234 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 ACTR5Q9H9F9 607 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 CD274Q9NZQ7 290 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 PSMC3IPQ9P2W1 217 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 PADI1Q9ULC6 663 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 SH2B3Q9UQQ2 575 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 AP1M2Q9Y6Q5 423 aa13.91□□□□□ -0.18
SQSTM1-205ENST00000464493 PKD1L2Q7Z442 2459 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 ZSCAN9O15535 394 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 KERAO60938 352 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 S100BP04271 92 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 KLK3P07288 261 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 TUBBP07437 444 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 COL6A2P12110 1019 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 EZRP15311 586 aaKnown RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 GLRBP48167 497 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 VSX2P58304 361 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 FRMPD2BQ6IN97 320 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 VASH2Q86V25 355 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 PLD6Q8N2A8 252 aaKnown RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 ZNF655Q8N720 491 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 PDPRQ8NCN5 879 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 EXT2Q93063 718 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 CABS1Q96KC9 395 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 LRFN5Q96NI6 719 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 ZNF285Q96NJ3 590 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 GPR78Q96P69 363 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 ATOH8Q96SQ7 321 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 CNOT10Q9H9A5 744 aaKnown RBP13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 LHX9Q9NQ69 397 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 RAB21Q9UL25 225 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms