RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GIPC3Q8TF64 312 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 SLC2A13Q96QE2 648 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 ZNF217O75362 1048 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 JUNP05412 331 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 THRBP10828 461 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 RPS13P62277 151 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 SMU1Q2TAY7 513 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.48□□□□□ -0.41
NUP58-206ENST00000463407 PDSS1Q5T2R2 415 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 GHDCQ8N2G8 530 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 MMABQ96EY8 250 aaPredicted RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 SLC2A11Q9BYW1 496 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 FANCFQ9NPI8 374 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 P2RX2Q9UBL9 471 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 RSL24D1Q9UHA3 163 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 DNAJC25-GNG10A0A024R161 153 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 FAM72CH0Y354 149 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 AGPSO00116 658 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 AGR2O95994 175 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 CAPGP40121 348 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 RPL5P46777 297 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 DLG1Q12959 904 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 MAPK14Q16539 360 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 DECR1Q16698 335 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 FAM72AQ5TYM5 149 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 FAM72DQ6L9T8 149 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 FAM72BQ86X60 149 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 MCOLN1Q9GZU1 580 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 VRTNQ9H8Y1 702 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 SAGE1Q9NXZ1 904 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 APOBEC3BQ9UH17 382 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 DUX1O43812 170 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 GPIP06744 558 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 ZNF433Q8N7K0 673 aaPredicted RBP12.48□□□□□ -0.41
NUP58-206ENST00000463407 SCAMP4Q969E2 229 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 ZNF570Q96NI8 536 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 LMAN1LQ9HAT1 526 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 PLGRKTQ9HBL7 147 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 SPATA7Q9P0W8 599 aa12.48□□□□□ -0.41
NUP58-206ENST00000463407 CAPN8A6NHC0 703 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 MEIS3P2A8K0S8 358 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 MUSKO15146 869 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 PGRMC2O15173 223 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 DSTNP60981 165 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 KLF1Q13351 362 aaPredicted RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 TMIGD1Q6UXZ0 262 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 KRT74Q7RTS7 529 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 ZC3HC1Q86WB0 502 aaKnown RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 C12orf40Q86WS4 652 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 CILP2Q8IUL8 1156 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 KBTBD2Q8IY47 623 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 C1GALT1C1Q96EU7 318 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 Q9N2J8 555 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 PDE7BQ9NP56 450 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 TMEM138Q9NPI0 162 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 THUMPD1Q9NXG2 353 aaKnown RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 NOX1Q9Y5S8 564 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 CASKO14936 926 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 OAZ2O95190 189 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 LYNP07948 512 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 STC1P52823 247 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 ELOAQ14241 798 aaKnown RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 ELAVL3Q14576 367 aaKnown RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 THAP5Q7Z6K1 395 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 GPR65Q8IYL9 337 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 APCDD1Q8J025 514 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 NATD1Q8N6N6 113 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 PHOSPHO2Q8TCD6 241 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 EBF4Q9BQW3 602 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 OR51V1Q9H2C8 321 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 GPC6Q9Y625 555 aaPredicted RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 IGKV6D-21A0A0A0MT36 114 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 A6NCN8 305 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 ACVR2AP27037 513 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 GANABQ14697 944 aaKnown RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 PTCHD3Q3KNS1 767 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 LACTB2Q53H82 288 aaPredicted RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 SVOPLQ8N434 492 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 FAM156AQ8NDB6 213 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 DNAJB8Q8NHS0 232 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 FOXJ1Q92949 421 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 BORCS6Q96GS4 357 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 MAGEE1Q9HCI5 957 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 SLC22A2O15244 555 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 VEGFDO43915 354 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 GPX6P59796 221 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 TLR1Q15399 786 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 PLEKHS1Q5SXH7 462 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 OR4F6Q8NGB9 312 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 PIWIL1Q96J94 861 aaKnown RBP12.47□□□□□ -0.41
NUP58-206ENST00000463407 PDCD10Q9BUL8 212 aa12.47□□□□□ -0.41
NUP58-206ENST00000463407 DERL2Q9GZP9 239 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms