RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 SERPINA11Q86U17 422 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 OR2T29Q8NH02 315 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 GIPC3Q8TF64 312 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 FOXJ1Q92949 421 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 ZNF689Q96CS4 500 aaPredicted RBP16.42■□□□□ 0.22
ACTB-207ENST00000462494 FAM83DQ9H4H8 585 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 VPS29Q9UBQ0 182 aa16.42■□□□□ 0.22
ACTB-207ENST00000462494 COL4A6Q14031 1691 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 MAGEB17A8MXT2 336 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 CFAP99D6REC4 459 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 E7EQ34 232 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 SLC16A5O15375 505 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 SLC16A6O15403 523 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 LAG3P18627 525 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 FMO3P31513 532 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 ETV3P41162 512 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 MAGEA2P43356 314 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 BMXP51813 675 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 POLR2LP62875 67 aaKnown RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 MOGQ16653 247 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 VMACQ2NL98 169 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 DEFB115Q30KQ5 88 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 TRIM60Q495X7 471 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 DUS1LQ6P1R4 473 aaKnown RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 Q6ZVL8 140 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 PIK3C3Q8NEB9 887 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 RNF217Q8TC41 542 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 ASZ1Q8WWH4 475 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 PLEKHA8Q96JA3 519 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 MYOCQ99972 504 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 GPN2Q9H9Y4 310 aaPredicted RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 IL1RAPQ9NPH3 570 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 DGKBQ9Y6T7 804 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 J3QRK9 145 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 KCNK5O95279 499 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 ZBTB11O95625 1053 aaPredicted RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 ANGPTL1O95841 491 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 C8AP07357 584 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 INHBBP09529 407 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 HTR1BP28222 390 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 RYKP34925 604 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 TRPC1P48995 793 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 DAPP51397 102 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 SRSF11Q05519 484 aaKnown RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 GALNT18Q6P9A2 607 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 THOC6Q86W42 341 aaKnown RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 HORMAD1Q86X24 394 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 ZZZ3Q8IYH5 903 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 POP5Q969H6 163 aaKnown RBP16.41■□□□□ 0.22
ACTB-207ENST00000462494 MUL1Q969V5 352 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 FBXL8Q96CD0 374 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 RAD21L1Q9H4I0 556 aa16.41■□□□□ 0.22
ACTB-207ENST00000462494 KPNA5O15131 536 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 CCL16O15467 120 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 FABP3P05413 133 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 HOXB6P17509 224 aaKnown RBP16.4■□□□□ 0.22
ACTB-207ENST00000462494 RECQLP46063 649 aaPredicted RBP16.4■□□□□ 0.22
ACTB-207ENST00000462494 ACSM2AQ08AH3 577 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 MTAPQ13126 283 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 NAE1Q13564 534 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 SPCS2Q15005 226 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 POM121L1PQ3SYA9 428 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 SYTL3Q4VX76 610 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 LIPJQ5W064 366 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 ACSM2BQ68CK6 577 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 ELMOD1Q8N336 334 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 SMYD1Q8NB12 490 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 DDHD1Q8NEL9 900 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 TM9SF3Q9HD45 589 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 PDP1Q9P0J1 537 aaPredicted RBP16.4■□□□□ 0.22
ACTB-207ENST00000462494 ERVK-11Q9UQG0 969 aa16.4■□□□□ 0.22
ACTB-207ENST00000462494 UGT2B11O75310 529 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 HNRNPCP07910 306 aaKnown RBP eCLIP16.39■□□□□ 0.22
ACTB-207ENST00000462494 ITGAMP11215 1152 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 LAMP1P11279 417 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 PABPC1P11940 636 aaKnown RBP16.39■□□□□ 0.22
ACTB-207ENST00000462494 FSHRP23945 695 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 KDELR2P33947 212 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 PREPP48147 710 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 WNT3P56703 355 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 VLDLRP98155 873 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 IL18R1Q13478 541 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 DOC2AQ14183 400 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 ZC3H12BQ5HYM0 836 aaKnown RBP16.39■□□□□ 0.22
ACTB-207ENST00000462494 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.39■□□□□ 0.22
ACTB-207ENST00000462494 LDLRAP1Q5SW96 308 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 Q6ZNX1 250 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 MSANTD1Q6ZTZ1 278 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 SLC15A4Q8N697 577 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 OR2A12Q8NGT7 310 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 SH3KBP1Q96B97 665 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 TPD52L3Q96J77 140 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 HHIPQ96QV1 700 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 RIOK2Q9BVS4 552 aaKnown RBP16.39■□□□□ 0.22
ACTB-207ENST00000462494 CEP44Q9C0F1 390 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 TRIT1Q9H3H1 467 aaKnown RBP16.39■□□□□ 0.22
ACTB-207ENST00000462494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.39■□□□□ 0.22
ACTB-207ENST00000462494 HCFC1R1Q9NWW0 138 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 KIF17Q9P2E2 1029 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms