RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ZNF425Q6IV72 752 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 HDXQ7Z353 690 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 ADCK2Q7Z695 626 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 PAQR7Q86WK9 346 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 DNAJC22Q8N4W6 341 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 PTGR2Q8N8N7 351 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-221ENST00000462352 NEIL2Q969S2 332 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 NXPE2Q96DL1 559 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 PHF21BQ96EK2 531 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 APOPT1Q96IL0 206 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 OR6C1Q96RD1 312 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 SMC6Q96SB8 1091 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 PLCD4Q9BRC7 762 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 APMAPQ9HDC9 416 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 FBXO8Q9NRD0 319 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 DNAJC11Q9NVH1 559 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 MKS1Q9NXB0 559 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 SLC39A1Q9NY26 324 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 SENP1Q9P0U3 644 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 TMCO1Q9UM00 188 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 DYRK1BQ9Y463 629 aa11.33□□□□□ -0.6
CPNE1-221ENST00000462352 SNRNP200O75643 2136 aaKnown RBP11.33□□□□□ -0.6
CPNE1-221ENST00000462352 GOLGA6L10A6NI86 522 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 A8MT66 165 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 H7BY64 318 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 AGPSO00116 658 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 HCRTR1O43613 425 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 CCNT2O60583 730 aaKnown RBP11.32□□□□□ -0.6
CPNE1-221ENST00000462352 PLIN3O60664 434 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 CTSVO60911 334 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 SPAG7O75391 227 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 TNFSF15O95150 251 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 PROCP04070 461 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 MSL3P1P0C860 447 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 MYZAPP0CAP1 466 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 TAC1P20366 129 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 HRH2P25021 359 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 GABRA4P48169 554 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 RAB15P59190 212 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 CDC16Q13042 620 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 PCBP2Q15366 365 aaKnown RBP eCLIP11.32□□□□□ -0.64e-26■■□□□ 14.3
CPNE1-221ENST00000462352 CCDC153Q494R4 210 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 CATSPEREQ5SY80 951 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 IGF2-ASQ6U949 168 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 LRRC70Q7Z2Q7 622 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 SLC5A11Q8WWX8 675 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 USP7Q93009 1102 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 PMEPA1Q969W9 287 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 ZNF501Q96CX3 271 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-221ENST00000462352 SLC46A1Q96NT5 459 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 PRAP1Q96NZ9 151 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 TAAR9Q96RI9 348 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 CTRCQ99895 268 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
CPNE1-221ENST00000462352 C12orf65Q9H3J6 166 aaKnown RBP11.32□□□□□ -0.6
CPNE1-221ENST00000462352 FGF21Q9NSA1 209 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 TMEM184CQ9NVA4 438 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 OPTCQ9UBM4 332 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 SNX7Q9UNH6 387 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 TNPO3Q9Y5L0 923 aaKnown RBP11.32□□□□□ -0.6
CPNE1-221ENST00000462352 KCNE2Q9Y6J6 123 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 AK5Q9Y6K8 562 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 AKAP13Q12802 2813 aa11.32□□□□□ -0.6
CPNE1-221ENST00000462352 A0A0J9YVX5 310 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 LRRC14BA6NHZ5 514 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 TMEM150CB9EJG8 249 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 C9orf172C9J069 976 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 K7EPI3 171 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 STX16O14662 325 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 HAT1O14929 419 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 POLR1CO15160 346 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 TYROBPO43914 113 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 BRINP1O60477 761 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 DLX3O60479 287 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 SIX3O95343 332 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 FGF5P12034 268 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 GNAZP19086 355 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 ATP5F1P24539 256 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 RBMS1P29558 406 aaKnown RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 EEF1DP29692 281 aaKnown RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 CSNK1G2P78368 415 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 NFKB2Q00653 900 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 IL11RAQ14626 422 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PDK4Q16654 411 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 ZC3H12BQ5HYM0 836 aaKnown RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 TMEM164Q5U3C3 297 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 FBXO42Q6P3S6 717 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 CYB5D1Q6P9G0 228 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 CEACAM20Q6UY09 585 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 RNF44Q7L0R7 432 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 TMPRSS11BQ86T26 416 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PPP1R3BQ86XI6 285 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 LSMEM2Q8N112 164 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 TEX9Q8N6V9 391 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 SNX31Q8N9S9 440 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 ABHD11Q8NFV4 315 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms