RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PIM1P11309 404 aaPredicted RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 EZRP15311 586 aaKnown RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 GABRB3P28472 473 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 CDKN2DP55273 166 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 ABATP80404 500 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 TIAL1Q01085 375 aaKnown RBP eCLIP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 TAP2Q03519 686 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 KCNC4Q03721 635 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 PRDX1Q06830 199 aaKnown RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 PDAP1Q13442 181 aaKnown RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 SSPNQ14714 243 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 FAM214AQ32MH5 1076 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 WASHC2DQ5SRD0 308 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 THEMIS2Q5TEJ8 643 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 PRAMEF13Q5VWM6 474 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 ZNF425Q6IV72 752 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 TRMT10BQ6PF06 316 aaKnown RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 CYHR1Q6ZMK1 362 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 PPP1R32Q7Z5V6 425 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 ADCK2Q7Z695 626 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 ANKMY2Q8IV38 441 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 TMEM151BQ8IW70 566 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 OR4N4Q8N0Y3 316 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 DTWD1Q8N5C7 304 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 GPATCH11Q8N954 259 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 FDCSPQ8NFU4 85 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 PTERQ96BW5 349 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 LINGO1Q96FE5 620 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 CABS1Q96KC9 395 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 C10orf90Q96M02 699 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 SPSB2Q99619 263 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 NUDT9Q9BW91 350 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 WDR54Q9H977 334 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 MLXIPLQ9NP71 852 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 UTP6Q9NYH9 597 aaKnown RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 GPR83Q9NYM4 423 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 STOX2Q9P2F5 926 aaPredicted RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 ADAMTS6Q9UKP5 1117 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 CORO1CQ9ULV4 474 aaPredicted RBP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.72□□□□□ -0.85
SF3A3-204ENST00000462258 RELNP78509 3460 aa9.72□□□□□ -0.85
SF3A3-204ENST00000462258 PABPN1LA6NDY0 278 aaKnown RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 A6NL46 340 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 H0YGG7 62 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 NDC80O14777 642 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 HAT1O14929 419 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 TP73O15350 636 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 ONECUT2O95948 504 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 IGHEP01854 428 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 AHSGP02765 367 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 FDXRP22570 491 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 RPL21P46778 160 aaKnown RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 OR1D4P47884 311 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 ARF3P61204 181 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 PDIA2Q13087 525 aaKnown RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 RAPSNQ13702 412 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 FRG1Q14331 258 aaKnown RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 FASTKD3Q14CZ7 662 aaKnown RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 NKG7Q16617 165 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 MUM1Q2TAK8 710 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 PRTGQ2VWP7 1150 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 DCAF10Q5QP82 559 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 TEDDM1Q5T9Z0 273 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 HECTD2Q5U5R9 776 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 FAM45BPQ6NSW5 357 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 PRMT9Q6P2P2 845 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 PAQR3Q6TCH7 311 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 MBOAT1Q6ZNC8 495 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 SHISA6Q6ZSJ9 500 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 OVCH1Q7RTY7 1134 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 PALM2Q8IXS6 379 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 LRRC56Q8IYG6 542 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 CSNK1A1LQ8N752 337 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 CLEC1AQ8NC01 280 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 FBXO36Q8NEA4 188 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 FAM45AQ8TCE6 357 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 EEF1AKMT1Q8WVE0 214 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 RERGQ96A58 199 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 FER1L6-AS2Q96M78 137 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 CCDC138Q96M89 665 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 SLC26A1Q9H2B4 701 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 SOX17Q9H6I2 414 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 SYNPO2LQ9H987 977 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 CUEDC1Q9NWM3 386 aaPredicted RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 P4HTMQ9NXG6 502 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 ZFATQ9P243 1243 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 CDC23Q9UJX2 597 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 NXT1Q9UKK6 140 aaKnown RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 PDE10AQ9Y233 779 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 RUVBL1Q9Y265 456 aaKnown RBP9.71□□□□□ -0.86
SF3A3-204ENST00000462258 SNX24Q9Y343 169 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 ZNF451Q9Y4E5 1061 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 PCDHGB7Q9Y5F8 929 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 MAU2Q9Y6X3 613 aa9.71□□□□□ -0.86
SF3A3-204ENST00000462258 E7ESA3 106 aa9.7□□□□□ -0.86
SF3A3-204ENST00000462258 AGPSO00116 658 aa9.7□□□□□ -0.86
SF3A3-204ENST00000462258 SLC16A5O15375 505 aa9.7□□□□□ -0.86
SF3A3-204ENST00000462258 P2RX6O15547 441 aa9.7□□□□□ -0.86
SF3A3-204ENST00000462258 TSPAN12O95859 305 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms