RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RPS9P46781 194 aaKnown RBP14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ERVFC1P60507 584 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 TUBA1BP68363 451 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 RCAN2Q14206 197 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 SMU1Q2TAY7 513 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 TUBA1AQ71U36 451 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ADCK1Q86TW2 530 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 CCDC103Q8IW40 242 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 CFAP206Q8IYR0 622 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 TBC1D21Q8IYX1 336 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 PARP8Q8N3A8 854 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ASZ1Q8WWH4 475 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 NACC2Q96BF6 587 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 TRMT2BQ96GJ1 504 aaKnown RBP14.98□□□□□ -0.01
LMNB1-203ENST00000460265 DACH2Q96NX9 599 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 ZIM2Q9NZV7 527 aa14.98□□□□□ -0.01
LMNB1-203ENST00000460265 FXYD1O00168 92 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 MANBAO00462 879 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 PDYNP01213 254 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 RPS14P62263 151 aaKnown RBP14.97□□□□□ -0.01
LMNB1-203ENST00000460265 LSM3P62310 102 aaKnown RBP14.97□□□□□ -0.01
LMNB1-203ENST00000460265 FNDC3BQ53EP0 1204 aaKnown RBP14.97□□□□□ -0.01
LMNB1-203ENST00000460265 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.97□□□□□ -0.01
LMNB1-203ENST00000460265 OR4F3Q6IEY1 312 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 TMEM220Q6QAJ8 160 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 ADCK2Q7Z695 626 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 ARMC8Q8IUR7 673 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 S100ZQ8WXG8 99 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 IRF7Q92985 503 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 RHBDF1Q96CC6 855 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 SLC32A1Q9H598 525 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 EXD2Q9NVH0 621 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 PDE10AQ9Y233 779 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 SCAMP1O15126 338 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 PRKD3O94806 890 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 CYP4B1P13584 511 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 ATP1B2P14415 290 aaPredicted RBP14.97□□□□□ -0.01
LMNB1-203ENST00000460265 SEPHS1P49903 392 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 GRSF1Q12849 480 aaKnown RBP eCLIP14.97□□□□□ -0.01
LMNB1-203ENST00000460265 LYPLAL1Q5VWZ2 237 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 ALG1LQ6GMV1 187 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 ZNF783Q6ZMS7 281 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 GALNT5Q7Z7M9 940 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 TCRBV3S1A0A5B6 114 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 M0QX08 132 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 TAPBPO15533 448 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 CCNKO75909 580 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 MATN4O95460 622 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 B3GALT4O96024 378 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 RHOP08100 348 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 CYP2A6P11509 494 aaPredicted RBP14.97□□□□□ -0.01
LMNB1-203ENST00000460265 TGM1P22735 817 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 LHCGRP22888 699 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 ARHGDIAP52565 204 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 IFITM3Q01628 133 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 SPCS2Q15005 226 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 RAET1GQ6H3X3 334 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 C11orf96Q7Z7L8 435 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 VRK3Q8IV63 474 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 HS3ST5Q8IZT8 346 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 POF1BQ8WVV4 589 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 MED30Q96HR3 178 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 WDR70Q9NW82 654 aa14.97□□□□□ -0.01
LMNB1-203ENST00000460265 ELOVL7A1L3X0 281 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 TBC1D3BA6NDS4 549 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 GPIP06744 558 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 CCR2P41597 374 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 PTSQ03393 145 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 CYP4F3Q08477 520 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 C5orf22Q49AR2 442 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 BROXQ5VW32 411 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 POC5Q8NA72 575 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 ZNF555Q8NEP9 628 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 OR13F1Q8NGS4 319 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 LHPPQ9H008 270 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 IGFLR1Q9H665 355 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 SMURF2Q9HAU4 748 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 DNAJC11Q9NVH1 559 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 OARD1Q9Y530 152 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 SOCS5O75159 536 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 NADKO95544 446 aaPredicted RBP14.96□□□□□ -0.01
LMNB1-203ENST00000460265 FGBP02675 491 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 BCKDHAP12694 445 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 HNF4AP41235 474 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 ZFAND4Q86XD8 727 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 DCP2Q8IU60 420 aaKnown RBP14.96□□□□□ -0.01
LMNB1-203ENST00000460265 TMEM132CQ8N3T6 1108 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 DTWD1Q8N5C7 304 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 LILRA3Q8N6C8 439 aaPredicted RBP14.96□□□□□ -0.01
LMNB1-203ENST00000460265 ADAMTS19Q8TE59 1207 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 TUBA1CQ9BQE3 449 aa14.96□□□□□ -0.01
LMNB1-203ENST00000460265 SMPD3Q9NY59 655 aaPredicted RBP14.96□□□□□ -0.01
LMNB1-203ENST00000460265 CATP04040 527 aaKnown RBP14.96□□□□□ -0.02
LMNB1-203ENST00000460265 DDX5P17844 614 aaKnown RBP14.96□□□□□ -0.02
LMNB1-203ENST00000460265 CXCR2P25025 360 aa14.96□□□□□ -0.02
LMNB1-203ENST00000460265 ITGB8P26012 769 aa14.96□□□□□ -0.02
LMNB1-203ENST00000460265 PRMT2P55345 433 aa14.96□□□□□ -0.02
LMNB1-203ENST00000460265 TRAF3Q13114 568 aa14.96□□□□□ -0.02
LMNB1-203ENST00000460265 CEP78Q5JTW2 689 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms