RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 LRRC37BQ96QE4 947 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 TBC1D10AQ9BXI6 508 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 KLHL25Q9H0H3 589 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 PCED1AQ9H1Q7 454 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 SLC40A1Q9NP59 571 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 SLC52A3Q9NQ40 469 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 WASH6PQ9NQA3 447 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 CCDC177Q9NQR7 707 aaPredicted RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 SPATA7Q9P0W8 599 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 GMPR2Q9P2T1 348 aaKnown RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 VTI1BQ9UEU0 232 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 DLGAP4Q9Y2H0 992 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 MDC1Q14676 2089 aaKnown RBP8.42□□□□□ -1.06
RIF1-208ENST00000457745 ASXL3Q9C0F0 2248 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 CACNA1EQ15878 2313 aa8.42□□□□□ -1.06
RIF1-208ENST00000457745 PIPSLA2A3N6 862 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 IFRD1O00458 451 aaPredicted RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 FBP2O00757 339 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 ANKRD28O15084 1053 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 VILLO15195 856 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 PPM1DO15297 605 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 BCAT2O15382 392 aaPredicted RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 YY2O15391 372 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 LAMTOR5O43504 91 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 HCRTR1O43613 425 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 LCMT2O60294 686 aaKnown RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 PIAS2O75928 621 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 PVRP15151 417 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 HMOX2P30519 316 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 CTSKP43235 329 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 RAE1P78406 368 aaKnown RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 REEP5Q00765 189 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 IRF8Q02556 426 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 DDX39BQ13838 428 aaKnown RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 LRP8Q14114 963 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 KIAA0040Q15053 153 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 CCDC6Q16204 474 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 PRSS53Q2L4Q9 553 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 DEFB133Q30KQ1 61 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 KIAA1614Q5VZ46 1190 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 GRHL2Q6ISB3 625 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 CAPN13Q6MZZ7 669 aaPredicted RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 NXPE4Q6UWF7 544 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 LCTLQ6UWM7 567 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 SLC36A4Q6YBV0 504 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 ASRGL1Q7L266 308 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 TAF8Q7Z7C8 310 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■■■■■ 92.8
RIF1-208ENST00000457745 SLC25A45Q8N413 288 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 AMER3Q8N944 861 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 ANKRD53Q8N9V6 530 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 KYQ8NBH2 561 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 OR4E2Q8NGC2 313 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 OR2L8Q8NGY9 312 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 SLC5A11Q8WWX8 675 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 RSC1A1Q92681 617 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 TUBGCP3Q96CW5 907 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 SPACA7Q96KW9 195 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 FCRL4Q96PJ5 515 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 MTERF1Q99551 399 aaKnown RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 MACROD1Q9BQ69 325 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 SIKE1Q9BRV8 207 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 IER2Q9BTL4 223 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 SORBS1Q9BX66 1292 aaKnown RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 SLC29A3Q9BZD2 475 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 STN1Q9H668 368 aaKnown RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 KIR3DX1Q9H7L2 352 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 AIG1Q9NVV5 245 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 APOBEC2Q9Y235 224 aaKnown RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 POLR3HQ9Y535 204 aaPredicted RBP8.41□□□□□ -1.06
RIF1-208ENST00000457745 GPR45Q9Y5Y3 372 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 GPR179Q6PRD1 2367 aa8.41□□□□□ -1.06
RIF1-208ENST00000457745 ZNF318Q5VUA4 2279 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 CCDC163A0A0D9SF12 145 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 LY6G6EA0A0G2JKS1 128 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 TRPC5OSA6NMA1 111 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 MAGEB17A8MXT2 336 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 SLCO1B7G3V0H7 640 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 H7BY64 318 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 TOR1BO14657 336 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 HAT1O14929 419 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 GFRA3O60609 400 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 CRCPO75575 148 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 DCTN3O75935 186 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 SORBS2O94875 1100 aaKnown RBP8.4□□□□□ -1.06
RIF1-208ENST00000457745 C1QCP02747 245 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 CHRM5P08912 532 aaPredicted RBP8.4□□□□□ -1.06
RIF1-208ENST00000457745 SP9P0CG40 484 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 C1GALT1C1LP0DN25 315 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 CAPN3P20807 821 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 CPOXP36551 454 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 NUDT1P36639 197 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 CASP2P42575 452 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 DPP6P42658 865 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 MAGEA9P43362 315 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 RAB28P51157 221 aa8.4□□□□□ -1.06
RIF1-208ENST00000457745 UFM1P61960 85 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms