RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ACOT13Q9NPJ3 140 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TLR9Q9NR96 1032 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 AASDHPPTQ9NRN7 309 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 IMPAD1Q9NX62 359 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ELOVL2Q9NXB9 296 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 THUMPD1Q9NXG2 353 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC25A37Q9NYZ2 338 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ANKMY1Q9P2S6 941 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ERVK-18Q9QC07 812 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 LHX3Q9UBR4 397 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF282Q9UDV7 671 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 VPS51Q9UID3 782 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMEFF2Q9UIK5 374 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 BTNL2Q9UIR0 455 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC25A13Q9UJS0 675 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MKLN1Q9UL63 735 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 DUSP12Q9UNI6 340 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 RNF6Q9Y252 685 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ANGPT4Q9Y264 503 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC27A5Q9Y2P5 690 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FCF1Q9Y324 198 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 FAM32AQ9Y421 112 aaKnown RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CCL27Q9Y4X3 112 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 ASB1Q9Y576 335 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDHB14Q9Y5E9 798 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDHB11Q9Y5F2 797 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDHGB3Q9Y5G1 929 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCDHGA10Q9Y5H3 936 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 MAGED1Q9Y5V3 778 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 U3KQV3 271 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 GREB1Q4ZG55 1949 aa3.24□□□□□ -1.89
HMGN1P18-201ENST00000457642 CHD5Q8TDI0 1954 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MN1Q10571 1320 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ANKRD12Q6UB98 2062 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CXorf51AA0A1B0GTR3 108 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SH3D21A4FU49 640 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 HTR3EA5X5Y0 456 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MGAT4DA6NG13 374 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 AGAP5A6NIR3 686 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TBKBP1A7MCY6 615 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 A8MVJ9 347 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 C5orf58C9J3I9 102 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 hCG_2039718K7EN88 272 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ARVCFO00192 962 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TNFRSF11BO00300 401 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TOR1BO14657 336 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRRG1O14668 218 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SCAMP3O14828 347 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SNPHO15079 494 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SCAMP2O15127 329 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TAPBPO15533 448 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 COCHO43405 550 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 NUAK1O60285 661 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 FZD6O60353 706 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MITFO75030 526 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 UPK1BO75841 260 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CCNB2O95067 398 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 LRATO95237 230 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 GJB5O95377 273 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 KRT75O95678 551 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 F11P03951 625 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CATP04040 527 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 HTR1AP08908 422 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ALPIP09923 528 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 DBTP11182 482 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CKBP12277 381 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 BMP4P12644 408 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRKAR2AP13861 404 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SELPP16109 830 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 BPIP17213 487 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 AMD1P17707 334 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PFKLP17858 780 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ALOX12P18054 663 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SDC1P18827 310 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 EFNA1P20827 205 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRKACGP22612 351 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TGM1P22735 817 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 NR4A1P22736 598 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 XPAP23025 273 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ALDH4A1P30038 563 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RRM2P31350 389 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 KDELR2P33947 212 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PCGF2P35227 344 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 IDUAP35475 653 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TIE1P35590 1138 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CHI3L1P36222 383 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 GGT2P36268 569 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 GGT5P36269 586 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 EIF2DP41214 584 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CSKP41240 450 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MAP2K4P45985 399 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RECQLP46063 649 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC11A1P49279 550 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ALDH7A1P49419 539 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRIM2P49643 509 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CLK3P49761 638 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 DAPP51397 102 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 C21orf58P58505 322 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 VBP1P61758 197 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 COPZ1P61923 177 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms