RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ACADVLP49748 655 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 CFHR1Q03591 330 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 CHIT1Q13231 466 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 CLPPQ16740 277 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 GGTA1PQ4G0N0 100 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 NKAIN2Q5VXU1 208 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 KIAA1614Q5VZ46 1190 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 ATG9BQ674R7 924 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 WDR74Q6RFH5 385 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 NXPE4Q6UWF7 544 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 GPRIN3Q6ZVF9 776 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 TMPRSS11BQ86T26 416 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 SYVN1Q86TM6 617 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 CUZD1Q86UP6 607 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 GRAMD1AQ96CP6 724 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 C7orf26Q96N11 449 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 CD180Q99467 661 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 SLC6A20Q9NP91 592 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 MRPS30Q9NP92 439 aaKnown RBP15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 CUEDC1Q9NWM3 386 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 PCNX2A6NKB5 2137 aa15.97■□□□□ 0.15
CCDC90B-202ENST00000455220 A0A0J9YY10 115 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 A0A1W2PQM1 296 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 TNFSF14O43557 240 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 C9P02748 559 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 HRH2P25021 359 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 LSSP48449 732 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 ERVPABLB-1P60509 514 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 IRF8Q02556 426 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 AMZ1Q400G9 498 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 CATSPEREQ5SY80 951 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 LIPJQ5W064 366 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 ZNF425Q6IV72 752 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 LETMD1Q6P1Q0 360 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 FAM129CQ86XR2 697 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 PLXDC1Q8IUK5 500 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 FAM20CQ8IXL6 584 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 CARFQ8N187 725 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 OR4F6Q8NGB9 312 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 OR4K1Q8NGD4 311 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 NCSTNQ92542 709 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 ATP6V1E2Q96A05 226 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 PTCD3Q96EY7 689 aaKnown RBP15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 ZDHHC12Q96GR4 267 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 MAGEB10Q96LZ2 347 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 CDK15Q96Q40 435 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 LRRN3Q9H3W5 708 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 ACTR8Q9H981 624 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 TNFRSF12AQ9NP84 129 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 MID1IP1Q9NPA3 183 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 SLCO1B3Q9NPD5 702 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 ANKMY1Q9P2S6 941 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 TRPS1Q9UHF7 1281 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 RAP2CQ9Y3L5 183 aa15.96■□□□□ 0.15
CCDC90B-202ENST00000455220 KCNE1BA0A087WTH5 132 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 TCP11X1B4DZS4 312 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 CASC3O15234 703 aaKnown RBP15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 CLDN9O95484 217 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 RPLP0P05388 317 aaKnown RBP15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 FGF4P08620 206 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 C1GALT1C1LP0DN25 315 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 CD22P20273 847 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 GRIA3P42263 894 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 GFERP55789 205 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 CCL7P80098 99 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 DOC2AQ14183 400 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 NAA25Q14CX7 972 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 TUBB8Q3ZCM7 444 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 XKR6Q5GH73 641 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 IRGCQ6NXR0 463 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 MILR1Q7Z6M3 343 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 TRIM73Q86UV7 250 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 DCBLD1Q8N8Z6 715 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 PPM1MQ96MI6 270 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 ZNF317Q96PQ6 595 aaPredicted RBP15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 DPYSL5Q9BPU6 564 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 DPH7Q9BTV6 452 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 EFCAB11Q9BUY7 163 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 SHCBP1LQ9BZQ2 653 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 ILKAPQ9H0C8 392 aaPredicted RBP15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 C1GALT1Q9NS00 363 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 TMEM184CQ9NVA4 438 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 SEMA5BQ9P283 1151 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 ADAM21Q9UKJ8 722 aa15.96■□□□□ 0.14
CCDC90B-202ENST00000455220 PTPRZ1P23471 2315 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 SPEGQ15772 3267 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 TLCD2A6NGC4 264 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 H7BY64 318 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 NTN3O00634 580 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 GIPC1O14908 333 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 OR4F21O95013 312 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 CPNE6O95741 557 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 ENO1P06733 434 aaKnown RBP15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 JUPP14923 745 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 MPSTP25325 297 aa15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 VARSP26640 1264 aaKnown RBP15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-202ENST00000455220 LSP1P33241 339 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms